Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g02816 | ATGTCACCCTCTTCTTCCTTACTAAAGCTCAAGCATAAGCCTCAATTCAGAGATGCGCTGAAACACTTCCTTTTGTGTTCTGCGGGGCCTTTTCCTTCCTTATGTCTTGTTGCGGGACGCAGCTCCAAGGCTAGGGTTTTCACTGCCTTAGCAGCGGTGGTGGAGCAAGAACACGTGGAGCGAGAAAATGATGAAGAGGAAGAGCAATTTAAGCAGACAAGAGCTACCGAAGTGTATGTGTGCAACCTTCCAAGAAGCTGTGACACAGAGCAACTACTTCACATGTTCAAGCCTCACGGATCCATTCTATCTATAGAGGTTTTCCGGAATCCGGAGACTGGTGAAAGTAAAGGGAGTGCTTATGTCACATTAGGATCTATTAACTCGACAAAAAATGCAATTGTTATTAGATGGAATGGTTGGAACTTGCGTTGA | 435 | 0.4529 | MSPSSSLLKLKHKPQFRDALKHFLLCSAGPFPSLCLVAGRSSKARVFTALAAVVEQEHVERENDEEEEQFKQTRATEVYVCNLPRSCDTEQLLHMFKPHGSILSIEVFRNPETGESKGSAYVTLGSINSTKNAIVIRWNGWNLR. | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g02816 | 144 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 76 | 144 | IPR000504 | GO:0003723 | |
Seca8g02816 | 144 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 78 | 134 | IPR000504 | GO:0003723 | |
Seca8g02816 | 144 | PANTHER | OS02G0815200 PROTEIN | 18 | 134 | - | - | |
Seca8g02816 | 144 | SMART | rrm1_1 | 77 | 144 | IPR000504 | GO:0003723 | |
Seca8g02816 | 144 | SUPERFAMILY | RNA-binding domain, RBD | 73 | 135 | IPR035979 | GO:0003676 | |
Seca8g02816 | 144 | Gene3D | - | 40 | 143 | IPR012677 | - | |
Seca8g02816 | 144 | Coils | Coil | 56 | 76 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g02816 | Seca-Chr8 | 77128940 | 77130380 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g02816 | 56 | 134 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 32.184 | 3.51e-06 | 43.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g02816 | - | - | gsj:114400287 | 117.857 |