Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02780 ATGGAGCCCTTTGTTTTGCCTCTTCTATTCTTCTCATTCTTAGTGGCGAATTCTAAAGGACAGCTCCAAGTGGGTTTCTATTCCAACATATGTCCTCAAGCAGAGCCCACTGTTTGTGTTGTTGTTAGAGATGTTGTTCTCTCTAACCCCAACATGGCTGCTGTCTTGCTCAGGCTTCAGTTTCATGGCTACTTTGCTGAGGGATGTGATGGTTCAATTCTGATCGACAATGTTCCACAATCAGAGAAACTAGCTTTTGCACATCAAGGGGTTAGGGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCAGACATAGCGGCATTGGCAGCCAGAGATGCCATAGTCATGGTCGAAAATGGACCAGGATACCAAGTTCCAACAGGGATGAGAGAAGGGTTGGTTTCTAATCTTTCACTTGCAGCTGATATGCCAGATGTTGATGATTCAATTCAGCTAGTCAAGGACATGTTTCTGAAGAAGGGTCTCACAGAGAAAGACCTTGTCCTTCTCAGTGGTACACTCAAGGACAAGATTCATCAAGGGAACTCCACTGCTTAA 594 0.4529 MEPFVLPLLFFSFLVANSKGQLQVGFYSNICPQAEPTVCVVVRDVVLSNPNMAAVLLRLQFHGYFAEGCDGSILIDNVPQSEKLAFAHQGVRGFGVIERAKAQLEASCPGVVSCADIAALAARDAIVMVENGPGYQVPTGMREGLVSNLSLAADMPDVDDSIQLVKDMFLKKGLTEKDLVLLSGTLKDKIHQGNSTA. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02780 197 PANTHER PEROXIDASE 25-RELATED 12 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 ProSiteProfiles Plant heme peroxidase family profile. 21 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 Gene3D - 25 155 - -
Seca8g02780 197 Pfam Peroxidase 42 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 SUPERFAMILY Heme-dependent peroxidases 21 184 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g02780 197 Gene3D Peroxidase, domain 2 156 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02780 Seca-Chr8 75619076 75619932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02780 9 184 Peroxidase AT4G25980 62.500 1.86e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02780 K00430 - gmx:547549 259.61