Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02771 ATGGCTGAGGTTGCTCTCATTGGTTCTGATATACAAGAGGTTATTGGCAGTGCTATTGCTATCAGGATTCTGAGTAATGGACTTGTGCCCCTTTGGGCTGGGGTTGTCATTATAGCTCTTGATTGTTTTATCTTTCTCTTTCTTGAGAACTATGGTCTGAGGTCATTAGAAGCCTTTTTTGCTGTTCTCATTGTTATAATGGCACTAGCGTTCGCATGGATGTTTGGTGAAGCAAAGCCCAGTGGCAAGGAACTTCTTCCTGGCATTGTGGTTCCAAAACTTAGCTCCAGAACTATACAGCAGGATGTTGAAGTTGTAGGCTGCCTTATAATGCCTCACAACGTGTTCTTGCATTCTGCTCTTGTTCAATCAAGGCAGATTGATCACAGAAACAAAAGTCCAGTTCAAGAGGCTCTTAACTATTACTCTATAGAGTCCACACTTGCCCTCATAGTCTCCTTTGTCATTAATATATTTGTCACAACTGTGTTTGCTAAAGGGTTTTATGGTTCTGAACTTGCAAGTGTTGCCTTTACACTTGTATGGTCCTCGGCGAGGAGATTTGATCAGCCACATAAGTACAAGCCATTTGTAAGCAGATGTGTTGTAAGGGGAAACCTTGAGATTGGGAGTCTGAGAGAAGTTGATGTAAAGTCAGGGCTTCCTGCTACTACAAGTACAGAAAGATTGGAGCTCCTTGATGATGATGAGCATATTCTCAGCATCAGGATATTATTGGTGGTGATCATAGACTTAGGGTAA 762 0.4199 MAEVALIGSDIQEVIGSAIAIRILSNGLVPLWAGVVIIALDCFIFLFLENYGLRSLEAFFAVLIVIMALAFAWMFGEAKPSGKELLPGIVVPKLSSRTIQQDVEVVGCLIMPHNVFLHSALVQSRQIDHRNKSPVQEALNYYSIESTLALIVSFVINIFVTTVFAKGFYGSELASVAFTLVWSSARRFDQPHKYKPFVSRCVVRGNLEIGSLREVDVKSGLPATTSTERLELLDDDEHILSIRILLVVIIDLG. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02771 253 Pfam Natural resistance-associated macrophage protein 1 175 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca8g02771 253 Gene3D - 171 246 IPR023393 -
Seca8g02771 253 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca8g02771 253 Pfam Polyketide cyclase / dehydrase and lipid transport 180 244 IPR019587 -
Seca8g02771 253 PRINTS Natural resistance-associated macrophage protein signature 28 47 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca8g02771 253 PRINTS Natural resistance-associated macrophage protein signature 53 74 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca8g02771 253 PRINTS Natural resistance-associated macrophage protein signature 102 125 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca8g02771 253 SUPERFAMILY Bet v1-like 176 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02771 Seca-Chr8 74892600 74894114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02771 1 175 Inorganic Solute Cotransporters AT2G23150 78.286 5.10e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02771 K21398 - gmx:100812381 296.975