Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02725 ATGATTGAAAGAGGAGAATGGCCACCCCTCATGGTTGTTTTTGATCCTCTAGAAGGATTCACTGTAGAAGCGGATAGATCCATAAGAGATTTGACAATAATAACAGAATATGTTGGAGATGTAGATTTTTTAAAGAATCGGGAAAATGATGATGGGGATAGCATAATGACACTTCTTTCAGCTTCTGATCCTTCCCAAACGCTTGTCATATGTCCCGATAAACGGAGTAACATAGCACGTTTCATTAATGGCATAAATAATCACACACCGGAAGGGAAAAAGAAGCAGAACTTAAAATGCGTGAGATTTGACGTCGATGGTGAATGTCGGGTTCTTTTAATTGCCAATAGAGATATAACAAAGGGGGAAAGGTTGTACTATGACTACAATGGATATGAACATGAATATCCAACTGAACATTTTGTCTAA 429 0.3776 MIERGEWPPLMVVFDPLEGFTVEADRSIRDLTIITEYVGDVDFLKNRENDDGDSIMTLLSASDPSQTLVICPDKRSNIARFINGINNHTPEGKKKQNLKCVRFDVDGECRVLLIANRDITKGERLYYDYNGYEHEYPTEHFV. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02725 142 Gene3D SET domain 1 142 IPR046341 -
Seca8g02725 142 ProSiteProfiles SET domain profile. 8 130 IPR001214 GO:0005515
Seca8g02725 142 CDD SET_ATXR5_6-like 5 142 - -
Seca8g02725 142 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 3 140 - -
Seca8g02725 142 SUPERFAMILY SET domain 3 130 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02725 Seca-Chr8 72396867 72398311 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca8g02725 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02725 K24406 - gmx:100775247 286.574