Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02714 ATGATAACACCAAGTAGCGAATTTCGTAACGGTGGGCCAACCCACCAAGCCCTTACTTCTCATGTTGGTCATGTCACTCTCAATACACTTCATACCACTCACTACGCTGGGAAGGAGATAAACATGGCATTTGCAGAAGGGGAGCCTTTCAAGAAAGTTTATGGCCCCTTTTTTGTGTATCTGAACAAAGGAGATTCACAAGCCCTCTGGTGTGATGCTGTACAACAGGTGCAACTGCTAATAACATTTAAATATACCACCATTTAA 267 0.4307 MITPSSEFRNGGPTHQALTSHVGHVTLNTLHTTHYAGKEINMAFAEGEPFKKVYGPFFVYLNKGDSQALWCDAVQQVQLLITFKYTTI. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02714 88 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02714 Seca-Chr8 67884511 67884926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02714 2 73 Polysaccharide Lyase AT1G09910 59.211 9.57e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02714 K18195 - gmx:100792575 119.783