Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02712 GTCTCCTTTGAATTGAAGTCCCTCCAGCGCCGCCCCTCCTTTGTCGTTGTCCCTCCTGCGCGACCCCTTCTTTGTCGTTGTCCCTCTTGCGTCGCCCCTTCTTTGTCGTTGTCCTTCCTGCGCCTCCGCATTCTCTCTTGCGCCATCGCCATCGCTAGGAGTATAGGGGAACTGTCAGCTAGAAGGCTTGCACAATTATTGGAGTCATGCAATGTTGGTTTGGTAGAAGAAGAATTCTTCTCCAAAAATGGATTCCCAAAGTCACCATTCCTTAATGGCTGGAAAGATGGCACTGTAGTTGTTGTGGTTGATGTGATTCATGTCACTCATGTTGCTGTGGCGATACTCCCTAAGGCTCAATCACAGACTTTGCTGAAGGGTGCAGTAGAGGAGCCTAAAAATCCTGGAGCCCAATGGTCTGTCAACCCGGCTGTGACATTTGGAGCTCTCATAGGTAGAAGGATCTCTGTGGTTCGTGCCATCTATTACTGGATTAGAGTTGTGATCAATGGTGGTTCTTTCATAGAATCCACTGTACTGACAAAGAAATCAACAGCAGCAAGTCCATAG 570 0.486 VSFELKSLQRRPSFVVVPPARPLLCRCPSCVAPSLSLSFLRLRILSCAIAIARSIGELSARRLAQLLESCNVGLVEEEFFSKNGFPKSPFLNGWKDGTVVVVVDVIHVTHVAVAILPKAQSQTLLKGAVEEPKNPGAQWSVNPAVTFGALIGRRISVVRAIYYWIRVVINGGSFIESTVLTKKSTAASP. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02712 189 Pfam Major intrinsic protein 141 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02712 Seca-Chr8 67767000 67769578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02712 141 170 Major Intrinsic Protein MIP AT1G17810 73.333 1.24e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02712 K09873 K11816 gmx:100817450 51.9878