Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02705 ATGGGGAGAAAGGGAGGAAGCTGGTTCTCGTCGGTAAAAAGAGTTTTCAAGTCATCATCTAAAGACTCGCCTGCACCAGTGCCGGAGAAGAAGAAGGTAAACAGAGAGAAATTGCAGCATGAAGCGGCAGAGGCAGAGGTGGTGTCTTTTGAGCATTTTCCTGCAGAGAGTTCTCCTGATGTCACCAACGAGGAGAGTAGCACATCAACGCCTGTGACTGAAGAAGATAGAAATCATGCTATTGCCGTTGCAGCAGCAACTGCTGCAGCTGCTGAAGCTGCTGTGGTAGCTGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCAGGTTATGGACGCCATTCCAAGGAAGAAAGAGCAGCAATACTCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCGTTGAAAGGATTAGTGAGGCTACAAGCACTGGTGAGGGGACACAATGTGCGGAAGCAAGCGCAGATGACAATGCGCTGTATGCAGGCATTAGTGCGGGTGCAGGCCCGAGTAAGAGCTCGCCGACTCCAGTTGAGTCACGAGAAAGAAGAACCGGAAAAGCAAGAGCCCAAGCCCATGAAGAAACATGAAGCTATAATGAAGAGGGAGAGAGCTCTTGCGTACGCTTTCAACTATCAGCAAGTAATGTGGTTATTGATTTAA 675 0.4933 MGRKGGSWFSSVKRVFKSSSKDSPAPVPEKKKVNREKLQHEAAEAEVVSFEHFPAESSPDVTNEESSTSTPVTEEDRNHAIAVAAATAAAAEAAVVAAQAAARVVRLAGYGRHSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHEKEEPEKQEPKPMKKHEAIMKRERALAYAFNYQQVMWLLI. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02705 224 MobiDBLite consensus disorder prediction 24 47 - -
Seca8g02705 224 MobiDBLite consensus disorder prediction 180 199 - -
Seca8g02705 224 MobiDBLite consensus disorder prediction 15 77 - -
Seca8g02705 224 MobiDBLite consensus disorder prediction 59 75 - -
Seca8g02705 224 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Seca8g02705 224 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
Seca8g02705 224 SMART iq_5 138 159 IPR000048 GO:0005515
Seca8g02705 224 SMART iq_5 115 137 IPR000048 GO:0005515
Seca8g02705 224 Gene3D - 113 167 - -
Seca8g02705 224 PANTHER IQ-DOMAIN 5-RELATED 1 218 - -
Seca8g02705 224 Pfam IQ calmodulin-binding motif 117 137 IPR000048 GO:0005515
Seca8g02705 224 Pfam IQ calmodulin-binding motif 143 158 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02705 Seca-Chr8 66315305 66323504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02705 1 220 IQD Protein Family AT3G49260 57.414 2.06e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02705 - - gmx:100798026 248.825