Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02686 ATGTTTGCAGAGACTGGTCTTCTCTTCCCATATTTGCAGAATTTCTCTCAAGAGTTTCAACAACTTGAGGAGTACTGCATGACCCAGAAGTCCAATGCTTCAATGCCATCAACACCTGGACTCTTTCAAAGTTCAGCTGAATATGTATTGGCACCTTTCATTTACACAAAACTTCTGTTGTGTTGCAAGAATGTGGTGTTTGTTGTTGTATTTGGTATTCATTGTGAAGGGAAATTGGGGAGTGACCTTGTTCAACCTTCTGCAATGTCAGAATATGATTTGTTAGTAGAGGGAGATCTATTCAAAGCACCTGAGCCTATTATTGAAGAACCAGTCATGGACCTCAATCCCATGCAAGCAGCCATGTCAATGATATCTTGTGGGGAAGATGTCTCCTCGCAGGGTCTAAAATCTTCAGATATTGATGTACTTCAAAATGAACAGCTACTGAGTGAGGTATACTATGAGTGTAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCGCTCTCTGAAATTCTGGAAATCAAGATTCCTGCTCTGAACATAGATGAGAATTTAATTCAAGAAAACAAACCTCTTCTTGACACACCTTTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGTTCTTTGGACTGGATGCATGGAGCTGCAATGAAGCCTGCCTTCCTTGATTTCCCTGGAATAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACGTTGGGCAATCTCCCCTTGAGAGGCCTTTTCTTCTCAGCAACTGCACGAGCGAGGAACGTCGAGAAAAGCTCTCCAGATATAGGAATAAGAAGACAAAGAGAAACTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAGGACAGAAGAATTTGATGTCAAGAGGCAATGA 981 0.4149 MFAETGLLFPYLQNFSQEFQQLEEYCMTQKSNASMPSTPGLFQSSAEYVLAPFIYTKLLLCCKNVVFVVVFGIHCEGKLGSDLVQPSAMSEYDLLVEGDLFKAPEPIIEEPVMDLNPMQAAMSMISCGEDVSSQGLKSSDIDVLQNEQLLSEVYYECKKDLLEKAAIESPLSEILEIKIPALNIDENLIQENKPLLDTPLPKSVSSGSLSSLDWMHGAAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLGNGNMNVGQSPLERPFLLSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFARTEEFDVKRQ. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02686 326 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 211 318 IPR045281 GO:0009909
Seca8g02686 326 Pfam CCT motif 276 318 IPR010402 GO:0005515
Seca8g02686 326 ProSiteProfiles CCT domain profile. 276 318 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02686 Seca-Chr8 63183349 63188468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02686 251 320 C2C2-CO-like Transcription Factor Family AT5G57660 40.278 1.31e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca8g02686 CCT 3.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02686 - - aprc:113853022 446.432