Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g02669 | ATGGAAAGGGAAGCCACATGCTTCTGTTCCTCACACGCACACACACTAGTGTCAATATTTGCTACAATCCTTCTCCTATTGCAACAAAATTGCCTCGCTAAGAAGCATCATCCACCATGCCCTCCTTCTTCATGCGGCAAAATCCACAACATTTCTTATCCATTCCGACTCAAAGGCGATCCAAGCTACTGTGGAGACCCAAGGTACCAATTAGATTGCGAGAACAACGGGACATTATTGTTGAATTTGTTCTCAGGGAAATACTATGTTCAAGACATTGATTACAAGAGGTACAAAATCCTATTGAGTGATGCAGGTGCAGTGGAGGATGCTAATTGCTCTTTCATCCCTCGCTATTTTCTCTACGATCGCAGTTTCAATGCACGCAGTTTCAAGGAGCTTGTTGGTCCAGATGATTTTGGATTAGAGCCGTTTATTTTGGACCCTATCGATCCTCCGCGAATAGCATATTTCAACTGTGTCAATCCAATCACCAATGATCCTCGATACGTGAAGGTGGATACCAGTCGATGTGGGACCCGAGGACATGTTTATGCAGTTGCGGAACCATCGTTGTTAGAGTATCACAAGGGGGACATTAAGGTTGGGTGCGAACTTATGGTGGCTACTTTGGGTAGTAGTAGGAGCTTGCCGGAGATTCAAAAGAGGAACGTGTCTTATGATGAAATCCATAGGATGATAATTGAAGGAGTTGAGGTGTCGTGGTTACCTGTGATCTGTGAAGATCGGTGTGGAAAGAGGACCAAATGCGAGGTTATCAATGAATCTAATGGAGAAGTCCAATGTGATAGGCACTACTGTCATTATGCCTACCAGACAACCGATAAATGCGGACTTCCGCAACAAATTATTGGTTATACTCGAGCTTATCTTAGAGGCATTATTTTTGGACTTCTGAGTAGAATAACATTTAGCACAAAGCAATTGGATAACCCAGTTGGACTACAATATTTTGATGGAGGAATTTTCATAGGACGAAATGTTATACCAGTAATTGTGGCAGTCAGATATGTGTTTGGAGTTGCACTTCTCCTTACGCTATTCATCTATAAGTGGCGACGAAGACATTTGTCAGTGTATGAAAACATTGAAAACTTTCTGGTAGAGAGCAATCTCAATCCCATTAGGTACGAGTACAAAGAAATCAAGAAAATGACCGGAGGTTTCAAAGTTAAATTGGGTCAAGGAGGCTTCGGATCCGTATACAAAGGAAAGCTCAGAAGTGGATTGGATGTAGCAGTGAAGATATTGACCAAATCCAATGCTAATGGACAAGACTTTATTAGTGAGGTAGCAACCATTGGAAGAATACATCATGTGAATGTGGTACGTCTTATTGGATATTGTGTTCATGGAAAAAAACGTGCTCTGGTTTACCAATTCATGCCTAATGGGTCATTGGATAAATACATTTTCTCTAAAGATGGAAGTGCCCCTTTAAGTTATGAGAAAATATATGAAATAGCTCTTGGAATAGCTCGTGGGATAGCATATCTGCATCAAGGCTGTGATATGCAAATTCTACATTTTGACATCAAGCCTCATAATATTCTTCTAGATGACAATTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTGAATGATAGCATTGTCACTTTAACTGCAGCAAGGGGAACTTTGGGTTACATGGCTCCAGAATTGTTCTATAAAAATATTGGAGGGATCTCTTATAAGGCTGATGTGTATAGCTTTGGAATGCTTTTGATGGAAATGGCAGGTAGGAGGAGAAACTCAAATCCTCATGCAGAGCATTCAAGCCAAGTTTACTTCCCCTTTTGGATCCATGATCAATTTAAAGAAGAAAAAGATGTTGGAATATTGGAAGATGCCTCAGAAGAGGAAAAGATTCAAGTAAAAAGGATGTTCATAGTTGCACTTTGGTGTATTCAATTGAAACCGAGTGATCGTCCTTCAATGAACAAGGTAGTGGAGATTCTTGAAGGGAAAGCTGAAAGCCTTGAAATGCCTCCAAGGCCTTCTTTTTATCCAAATGAAACAATAGGACATAATGATGAAATCAACTCTGACCAAACATCTTGGAGTGATTCATCTAGTTCTGATATGTATCTTACTGAAACTCGTAACTAA | 2145 | 0.4019 | MEREATCFCSSHAHTLVSIFATILLLLQQNCLAKKHHPPCPPSSCGKIHNISYPFRLKGDPSYCGDPRYQLDCENNGTLLLNLFSGKYYVQDIDYKRYKILLSDAGAVEDANCSFIPRYFLYDRSFNARSFKELVGPDDFGLEPFILDPIDPPRIAYFNCVNPITNDPRYVKVDTSRCGTRGHVYAVAEPSLLEYHKGDIKVGCELMVATLGSSRSLPEIQKRNVSYDEIHRMIIEGVEVSWLPVICEDRCGKRTKCEVINESNGEVQCDRHYCHYAYQTTDKCGLPQQIIGYTRAYLRGIIFGLLSRITFSTKQLDNPVGLQYFDGGIFIGRNVIPVIVAVRYVFGVALLLTLFIYKWRRRHLSVYENIENFLVESNLNPIRYEYKEIKKMTGGFKVKLGQGGFGSVYKGKLRSGLDVAVKILTKSNANGQDFISEVATIGRIHHVNVVRLIGYCVHGKKRALVYQFMPNGSLDKYIFSKDGSAPLSYEKIYEIALGIARGIAYLHQGCDMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPVNDSIVTLTAARGTLGYMAPELFYKNIGGISYKADVYSFGMLLMEMAGRRRNSNPHAEHSSQVYFPFWIHDQFKEEKDVGILEDASEEEKIQVKRMFIVALWCIQLKPSDRPSMNKVVEILEGKAESLEMPPRPSFYPNETIGHNDEINSDQTSWSDSSSSDMYLTETRN. | 715 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g02669 | 714 | ProSitePatterns | Protein kinases ATP-binding region signature. | 400 | 422 | IPR017441 | GO:0005524 | |
Seca8g02669 | 714 | Gene3D | Phosphorylase Kinase; domain 1 | 370 | 468 | - | - | |
Seca8g02669 | 714 | FunFam | serine/threonine-protein kinase PBS1-like | 365 | 468 | - | - | |
Seca8g02669 | 714 | Pfam | Wall-associated receptor kinase galacturonan-binding | 40 | 104 | IPR025287 | GO:0030247 | |
Seca8g02669 | 714 | SMART | serkin_6 | 394 | 664 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g02669 | 714 | CDD | STKc_IRAK | 400 | 667 | - | - | |
Seca8g02669 | 714 | MobiDBLite | consensus disorder prediction | 673 | 714 | - | - | |
Seca8g02669 | 714 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 367 | 686 | IPR045874 | GO:0004672 | |
Seca8g02669 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 469 | 675 | - | - | |
Seca8g02669 | 714 | Pfam | Protein kinase domain | 398 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g02669 | 714 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 514 | 526 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g02669 | 714 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 666 | IPR011009 | - | |
Seca8g02669 | 714 | FunFam | PR5-like receptor kinase | 469 | 677 | - | - | |
Seca8g02669 | 714 | MobiDBLite | consensus disorder prediction | 686 | 714 | - | - | |
Seca8g02669 | 714 | ProSiteProfiles | Protein kinase domain profile. | 394 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g02669 | Seca-Chr8 | 62499160 | 62505420 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g02669 | 383 | 698 | Receptor kinase-like Gene Family | AT5G38280 | 51.553 | 3.09e-105 | 334 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Seca8g02669 | Pkinase | 9.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g02669 | - | - | gmx:100820366 | 1081.63 |