Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02667 ATGAAAGTAGCTTCTCTGGTTTCTTTGAGCTGTTTATTTTGTTTAGTCTTTGTGGCTGGTATTGTTGAAGGCTGCTGGGTCGGTCTCTGTGAAGTTTTCTGTGTTGGGACTGACTCTGATTTTGCTCCAATGCAGATGAAGGTCAAGTCTGTGCCTCTCATGTTAAGATTGCAATTGGATTTTTCACTTTTTGATTCTAGTTCGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATAATTGCCAATGCTGGGGATTGTTGA 288 0.4167 MKVASLVSLSCLFCLVFVAGIVEGCWVGLCEVFCVGTDSDFAPMQMKVKSVPLMLRLQLDFSLFDSSSLDISSGTTALTALVFGRTMIIANAGDC. 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02667 95 Gene3D - 41 95 IPR036457 -
Seca8g02667 95 SUPERFAMILY PP2C-like 53 95 IPR036457 -
Seca8g02667 95 Pfam Protein phosphatase 2C 64 95 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02667 Seca-Chr8 62460496 62463681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02667 57 95 PP2C-type Phosphatase Gene Family AT2G33700 71.795 4.88e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02667 K14803 - gmx:100778015 58.9214