Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02665 ATGGTTGCATTAGCCCTGGTAGCAGTTGCAGCTGATCAAGTCACACCAAAACAAACCTTGCCTGGCTGCAATTACACTTGTGGAGATGTCCAAATTCCATATCCATTCGGCATAGGCAATTCATCTACAGATCAACGACCCTGTTTCTTGGAGCGCAAATTTAATCTTACCTGTAATGACTCCAAATTGTATTTGGGTAAGGGTAACGTACAACTTTTACACATAGACAACCTGAAAGGTCAAGTAGACGTGTTGTTTTATGTCTCAAAGCATTGCTATATGCAAAATGTAACCTCGGTACTGCTGCGCGCTTACAGCATTTCAAACAAGGAAAACAAGTTCGTAACTGTCGGCCGCGATAGTTATGGCTATCTCAACAACTTTGATCACTACGGGAACTTGTATTCAACTGGGTGCTTGACAAGATGTTATGGAAACGAAATGATCAATGATGGAAATTGTTCAGGCATAGGGTGTTGCCAGGTGGATATACCTCCTGGAATGAGGAATATCAGTGTACAAGCATTTGGCTTCAATTCAACGAAATCTTTGGGAACCTGCAGCTATTCCTTTGTTGTCAAACAAGGCAACTATACTTTTTCTACCTCTCATTTACACGATTTTCCTAATGAGACATTGCCAGTGGTTCTTGATTGGAGCGTCGGATCCGAGAACTGTAGTATTGCTTCCATGGATGGACTCCACTATGCATGCATGGACAACAGCTTTTGCGACGACAATGATACAGATTATGGTTACAGATGCAGATGCAAACCAGGTTATGAAGGAAACCCGTATCATCCGGAAGGCTGCATAGATATCGATGAATGTAAGACATTGAATCATACTTGTCCAAATGATTCATATTGTCACAACACCTATGGGTCTTACGAATGTTTATGTCCTAAGGGTCTATCCGGCAATGGAACAGTGGCAGGAGGGTGCCATCGACGTGATGTACGTACCATGATTCTCATTGATATTTTCAATGCAGCACTAGGAGCAGGATTAACGGTTCTGTTTGTGGGGATTTCCTCGATCTACTTATTATACCAAAGAAGGAAACTAATCAAACTAAAAGAGAAATTCTTTCATGAGAATGGGGGTTTCATTTTACTACAGCAACTGCATACAAGAGAAAACTCCTCCCAAGCTACTCAAGTTTTCACAGAGGAACAACTGAATAAGGCCACCAACAACTATGACGAGAGCCTAATCATTGGTAGAGGAGGTTATGGTACTGTTTTCAAAGGATCTCTACCAGATGACAGAATTGTGGCTATCAAGAAGTCCAAAATAGTAGATAAGAGCCAAGTGGATCAATTCATTAACGAGGTTGTTGTTCTATCCCAAATAAATCATAAGAATGTGGTCAAACTCTTGGGATGTTGTTTAGAGACAGAAGTTCCTTTACTGGTTTATGAATTTGTTAGCAATGGTACGCTTTCTGATTTTATACACACTAAAAGCAAAGAAAGTCATGTAACATGGGAAACCCGTCTAAGGATAGCAGCAGAGGCAGCTGAAGCTCTATCATATTTGCATTCCTCTGCCTCAATACCCATTATCCATGGAGATGTCAAGAGTGCCAACATCCTCTTGGATGGTGACAACACTGCCAAAGTGTCTGATTTCGGAACTTCAAAATTGGTTGCCCTTGATCAAATTGACATCGCTACAATGGTTCAGGGGACTATTGGCTACTTAGACCCAGAGTACATTCAAACACATCAATTGACAGAGAAAAGTGATGTCTATAGCTTTGGGGTAGTACTTGTAGAGTTGCTAACAGGGGAGAAACCTGTTTCTTTTGATAGGCTAGAAGAGAAAAGAAACCTTGTGATGCATTTTCTATCTTGTTTGAAACAAGATCGCATGTTTGATGTTATTCAAGTTGGCATCTTGTGTGAAGAAAATAAGCATGAGATCAAGGAGGTTTCTATTCTTGCAGCAAAGTGTTTGAGACATAATGGAGAGGAAAGACCTAGCATGAAGGAAGTGGCTAAAGAGTTGGAGGGAATAAGGGTAATGGAGAAGCATCCGTGGACCAATACAGACATAAATCTAGAGGAGACTCAGTACTTACTTCATGAGGCATCATCTGGCATTTTTGAACCCGGTGATAGTAGTAGCCATGGATATACTGGGTACGACAGCTTGAGAGATCATGTACTAGAACCCTGGAATGATGGAAGATGA 2199 0.4106 MVALALVAVAADQVTPKQTLPGCNYTCGDVQIPYPFGIGNSSTDQRPCFLERKFNLTCNDSKLYLGKGNVQLLHIDNLKGQVDVLFYVSKHCYMQNVTSVLLRAYSISNKENKFVTVGRDSYGYLNNFDHYGNLYSTGCLTRCYGNEMINDGNCSGIGCCQVDIPPGMRNISVQAFGFNSTKSLGTCSYSFVVKQGNYTFSTSHLHDFPNETLPVVLDWSVGSENCSIASMDGLHYACMDNSFCDDNDTDYGYRCRCKPGYEGNPYHPEGCIDIDECKTLNHTCPNDSYCHNTYGSYECLCPKGLSGNGTVAGGCHRRDVRTMILIDIFNAALGAGLTVLFVGISSIYLLYQRRKLIKLKEKFFHENGGFILLQQLHTRENSSQATQVFTEEQLNKATNNYDESLIIGRGGYGTVFKGSLPDDRIVAIKKSKIVDKSQVDQFINEVVVLSQINHKNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTKSKESHVTWETRLRIAAEAAEALSYLHSSASIPIIHGDVKSANILLDGDNTAKVSDFGTSKLVALDQIDIATMVQGTIGYLDPEYIQTHQLTEKSDVYSFGVVLVELLTGEKPVSFDRLEEKRNLVMHFLSCLKQDRMFDVIQVGILCEENKHEIKEVSILAAKCLRHNGEERPSMKEVAKELEGIRVMEKHPWTNTDINLEETQYLLHEASSGIFEPGDSSSHGYTGYDSLRDHVLEPWNDGR. 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02665 732 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 680 IPR045274 GO:0007166
Seca8g02665 732 Gene3D Phosphorylase Kinase; domain 1 371 476 - -
Seca8g02665 732 ProSiteProfiles Protein kinase domain profile. 401 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02665 732 SMART serkin_6 401 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02665 732 Pfam Protein tyrosine and serine/threonine kinase 407 671 IPR001245 GO:0004672|GO:0006468
Seca8g02665 732 CDD STKc_IRAK 407 674 - -
Seca8g02665 732 SMART egf_5 276 316 IPR000742 -
Seca8g02665 732 SMART egf_5 225 272 IPR000742 -
Seca8g02665 732 FunFam Fibrillin 2 268 312 - -
Seca8g02665 732 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 290 301 IPR000152 -
Seca8g02665 732 ProSiteProfiles EGF-like domain profile. 273 311 IPR000742 -
Seca8g02665 732 FunFam Wall-associated receptor kinase 2 477 694 - -
Seca8g02665 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Seca8g02665 732 SUPERFAMILY Protein kinase-like (PK-like) 382 672 IPR011009 -
Seca8g02665 732 Pfam Wall-associated receptor kinase galacturonan-binding 23 81 IPR025287 GO:0030247
Seca8g02665 732 SUPERFAMILY EGF/Laminin 273 308 - -
Seca8g02665 732 ProSitePatterns Calcium-binding EGF-like domain signature. 273 299 IPR018097 GO:0005509
Seca8g02665 732 Pfam Calcium-binding EGF domain 273 315 IPR001881 GO:0005509
Seca8g02665 732 FunFam Wall-associated receptor kinase 2 371 476 - -
Seca8g02665 732 Gene3D Transferase(Phosphotransferase) domain 1 477 694 - -
Seca8g02665 732 SMART egfca_6 273 316 IPR001881 GO:0005509
Seca8g02665 732 Gene3D Laminin 224 313 - -
Seca8g02665 732 ProSitePatterns Protein kinases ATP-binding region signature. 407 430 IPR017441 GO:0005524
Seca8g02665 732 CDD EGF_CA 273 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02665 Seca-Chr8 62433344 62437477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02665 3 722 Receptor kinase-like Gene Family AT1G21230 44.534 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca8g02665 PK_Tyr_Ser-Thr 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02665 - - gsj:114381577 963.755