Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02662 ATGATATCGGGTTCAGGAATCTGCGCAAAGAGGGTGGACGTTGACACGCGCCACCACATGCTTGGTCATCTCGCTTCCATTATAGCGAAGAAGCTTCTCAATGGACAGGAAGTCAGACTTGCTCGTTTCAAGGTTTATGAGGGAATCCCTCCTCCATATGGCCATATGACAAGATGA 177 0.4859 MISGSGICAKRVDVDTRHHMLGHLASIIAKKLLNGQEVRLARFKVYEGIPPPYGHMTR. 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02662 58 Gene3D Ribosomal protein L13 7 42 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca8g02662 58 PANTHER RIBOSOMAL PROTEIN L13 5 37 IPR005822 GO:0003735|GO:0005840|GO:0006412
Seca8g02662 58 SUPERFAMILY Ribosomal protein L13 14 50 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02662 Seca-Chr8 62379542 62379718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02662 1 42 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 71.429 7.53e-16 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02662 K02872 - gmx:100808497 68.5514