Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02661 ATGAAGAACCCCAAACGCCACCCGCCGGAGTCATCTCTCCGGCGTGTGGCCTCCGACGAGAATGTCAAGGGTTTCAAGAATGCTCGCCGGAGGAGACTCAAAATCCGGCGAGTGAAGTACAGCTGCCAGGCGAAGATCCACGTCGGAAATGGCGCCGGCGGCAATGAGCAAAGGGAGATTCACGAAGCCGTGGAGATATCGCTGTCGCTGGCGTCGACGTCGTCATCGGAGGAGGAGGATCGGTCGTCGACGGGAAACGACGCCGTTTTTTCGTATGGTTCGGTGTCGGTGATAGGGAAGAGGAAGGAGATGGAGGACGCGGTGAGCGTGGAGATAGGGCTTGTTGCAAAGGAGAGAGCAAAGTGTGACTTCTTCGCCGTATACGACGGTCACGGCGGAGCTCAGGTGGCGCTAGCTTGCCGTGAGCGGTTGCACCGACTAGTTGCAGAGGAGGTGGAGAGGTGCGTGGATGAGGTGGAGTGGGACTGGGAGGAAATGATGGAAGGGTGTTTCCGTAAAATGGATAGTGAGGTAGCGGATAATGCGGCGGTGAGGACAGTCGGTTCCACGGCGGTTGTGGCCGTTGTAGCCGCGAAGGAGGTGGTCGTCGCTAATTGCGGCGACTCTAGGGCTGTGATGGGAAGAGGAGGTAAAGCCGTGGACTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAATTGATGCGAATCGAAGAAGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTGGGTGTTCTTGCCACTTCGCGATCTATAGGTTAG 792 0.5707 MKNPKRHPPESSLRRVASDENVKGFKNARRRRLKIRRVKYSCQAKIHVGNGAGGNEQREIHEAVEISLSLASTSSSEEEDRSSTGNDAVFSYGSVSVIGKRKEMEDAVSVEIGLVAKERAKCDFFAVYDGHGGAQVALACRERLHRLVAEEVERCVDEVEWDWEEMMEGCFRKMDSEVADNAAVRTVGSTAVVAVVAAKEVVVANCGDSRAVMGRGGKAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIG. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02661 263 SMART PP2C_4 81 263 IPR001932 -
Seca8g02661 263 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Seca8g02661 263 ProSiteProfiles PPM-type phosphatase domain profile. 91 263 IPR001932 -
Seca8g02661 263 PANTHER PROTEIN PHOSPHATASE 75 263 IPR015655 GO:0004722|GO:0006470
Seca8g02661 263 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g02661 263 Pfam Protein phosphatase 2C 92 263 IPR001932 -
Seca8g02661 263 CDD PP2Cc 90 263 IPR001932 -
Seca8g02661 263 Gene3D - 84 263 IPR036457 -
Seca8g02661 263 SUPERFAMILY PP2C-like 83 263 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02661 Seca-Chr8 62346128 62349363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02661 92 263 PP2C-type Phosphatase Gene Family AT1G07430 51.309 1.43e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02661 K14497 - gmx:100807235 329.331