Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02639 ATGGGAGATTGGAATCAGAAAAACCTCATACATGAGCTACTACGGGGCATGGAGCTAGCAAAGCAACTCCAAATCTCTCTCCACGTGTCTTCTATGCCCCAAGAAAGCCGCGAGATTCTGATCCAGGAGATCTTAGTCGCATTTGAAAAGGCACTTCAATTGGCGAATTTTAATGTTGGGCTAGTGGGTGAGCCTTCACAAATGCCCTCAAGGGTTGCAATTCGAGGGTCAAAGTCACCACCTTTAAGTGGAAGCCCTCGAAGTGAAGACTCAGACAGAGATCTGATGGACTTGGAGCTGAGTGCCTCTAGAAAGAGGAAAACTATACCAAGATGGACAAAAAAGATTCGAGTTATTCCTGGGATGGGAGTGGAAGGGTCTCTTGATGATGGATATAGTTGGAGAAAATATGGTCAGAAAGACATTCTTGGAGCCAAGTTCCCAAGAGGATATTATAGATGCACCCACAGAAATGTTCAAGGCTGCATGGCCACAAAGCAAGTGCAAAGATCAGATGAAGACCCAACTGTCTTTGAGATCAATTACAGGGGAAAGCACACCTGCACAATGGCCGTCGATGTGGTACCTGATCCATTACAACCACAAGATAAAGAAGAAGAGACTAATTTGAGGACCACAGGTCCAGAGCAACAATATGACCAACAAAGTCTTGAGCAGCAATCAAGTGATATACTTTTGAACCTTCGTGGAGAGGTAAGGGTCCAAACAGGGAACTTAGATCATGATCATCATACCCCTCACCAATCATTTGCTTCATTCCATTTCCCTTCAACTTCAAATATAAAAACTGAAGAGCAAGTTTTCCCTTCCCCAATGATTGACAACAACTTCGCAGAAAACTTTAGCTATCCTTCATATGTGTCGCCTGCCACATCTGGAACAAACTATTTTGTGTCTCCGAGTGGAGGGAACAGCTTTAAGGAGCCCCAAAATGTGGGAAGTTCTGGGTTTGAGATCAATGACACGATCTCATCAGCTGCAAACTCTCTAACCGTTGGCTTAGAGTTTCCATTTGATCATGATTTTCCATTAGACGGCCAACACTTCACTTTCAATAACCCACGATTCTCCTAA 1095 0.4393 MGDWNQKNLIHELLRGMELAKQLQISLHVSSMPQESREILIQEILVAFEKALQLANFNVGLVGEPSQMPSRVAIRGSKSPPLSGSPRSEDSDRDLMDLELSASRKRKTIPRWTKKIRVIPGMGVEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCMATKQVQRSDEDPTVFEINYRGKHTCTMAVDVVPDPLQPQDKEEETNLRTTGPEQQYDQQSLEQQSSDILLNLRGEVRVQTGNLDHDHHTPHQSFASFHFPSTSNIKTEEQVFPSPMIDNNFAENFSYPSYVSPATSGTNYFVSPSGGNSFKEPQNVGSSGFEINDTISSAANSLTVGLEFPFDHDFPLDGQHFTFNNPRFS. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02639 364 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g02639 364 SUPERFAMILY WRKY DNA-binding domain 127 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g02639 364 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g02639 364 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 291 IPR044810 GO:0003700
Seca8g02639 364 Gene3D WRKY domain 122 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g02639 364 MobiDBLite consensus disorder prediction 196 224 - -
Seca8g02639 364 MobiDBLite consensus disorder prediction 71 95 - -
Seca8g02639 364 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g02639 364 FunFam WRKY transcription factor 53 114 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02639 Seca-Chr8 61259989 61262071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02639 1 265 WRKY Transcription Factor Family AT4G23810 40.345 1.97e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca8g02639 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02639 - - gmx:100776906 392.504