Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02636 ATGAAGTTAGAATTGGCGATAACCTCCAAAGAAATCATCAAACCATCTTCTCCAACCCCTAACCATCTTCGTTACTACCAACTCTCCTTTCTCGACCAAGTCGCTCCCATTGTTTATAACCCTTTGGTTCTATTTTACTCTTCCGACGGTACCGCTCAATTCAACACAACCACCATATCCAACCAGCTAAAGAAATCTCTATCACATGTCTTAACCCATTTCTACCCACTTGCGGGAAGAATTAATAATACCAAGAGTTTCATAGAGTGCAACGATGAGGGCATTCCCTACTTAGAAGCAAAAGTGAAGTCCAAACTTGTGGACATTATTCATCAGCCAGTCCCAAGAGAACTCAACCATTTGCTTCCATTTCAACTAGATGATATCACTGACGTCCCATTTGGTGTTCAACTTAACGTCTTTGATTGTGGTGGTATTGCGATTGGTGCATGCCTTTCTCACCAAATTGCAGACGGTTTATCATTTTTCACTTTCCTCAACAAATGGGCATCTATTGCTAGTGGACAAGATGTGCTGCCATTGCCAAAACCACAATTTGTTTCAGCTAAGCACTTTCCACCTAAAAACGTATCTGTGTTATATCCTCAAGGTGACATCACGAAGCAGAACATAATATGCAAGATGTTTGTGTTTAATGCTTCCGTTATTGAAAATCTGAAGGTGAAATATGCTGATAGCCCAGACTTCAAAGACGAGAAGTTCCCCACACGTGTCGAGGCTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTCACTAGAGACGAATATTCTTGTCCACAGAGAAGATATGTTGTGGTTCATGCAGTGAACCTGCGTCCAAAGATGGAACCTTCACTGCCTCCAGATTCATTTGGTAACTACTTCCGATTCATTATGACTATTCCAACGTTGAACGTTGGAGAGGAGTGTTATGGGCTAGCAAAGCAGATAAGGAATGAGGTAAAGAAGATTGACAAGGAGTATGTGAGAAAACTCCCAGAGGGTAATGGGCATTTGGATTTCCTTAAGGATAACTGGGATAGAGTGCTTGTGAAGGAGGAGTTAGTTTCGTTTAGTTTCACTAGTTGGTGTAGGTTTCCTGTGTATGATGCTGATTTTGGTTGGGGAAAACCAATATGGGTAGGTACTCCTGCTTTTAATTTAAGAAATTTGGTTGTGTTTGTTGACACCAAGATCGGTGGTGGCATAGAGGCGTATGTTAGCTTGAAGGTGGAAGACATGGCAAAGTTTGAAGCAGATGAGGAGTTTCTTGCATGTGTGAATAAAGAACGGACTTATTGA 1305 0.4146 MKLELAITSKEIIKPSSPTPNHLRYYQLSFLDQVAPIVYNPLVLFYSSDGTAQFNTTTISNQLKKSLSHVLTHFYPLAGRINNTKSFIECNDEGIPYLEAKVKSKLVDIIHQPVPRELNHLLPFQLDDITDVPFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNKWASIASGQDVLPLPKPQFVSAKHFPPKNVSVLYPQGDITKQNIICKMFVFNASVIENLKVKYADSPDFKDEKFPTRVEALSAFIWSRYVAVTRDEYSCPQRRYVVVHAVNLRPKMEPSLPPDSFGNYFRFIMTIPTLNVGEECYGLAKQIRNEVKKIDKEYVRKLPEGNGHLDFLKDNWDRVLVKEELVSFSFTSWCRFPVYDADFGWGKPIWVGTPAFNLRNLVVFVDTKIGGGIEAYVSLKVEDMAKFEADEEFLACVNKERTY. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02636 434 PANTHER F21J9.9 7 428 - -
Seca8g02636 434 Gene3D - 2 199 IPR023213 -
Seca8g02636 434 Pfam Transferase family 5 424 - -
Seca8g02636 434 Gene3D - 208 427 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02636 Seca-Chr8 60982773 60984077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02636 3 419 Monolignol Biosynthesis Gene Families AT5G48930 26.786 5.21e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02636 K13065 - gmx:102670206 612.068