Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02570 ATGTCTAGCACAGTTGGCAAGGTCATCAAGTGCAGAGCTGCTGTTTCATGGGAGGCAGGGAGGCCACTAGTGATTGAAGAAGTAGAGGTGGCACCACCCCAAGCAGGTGAAGTGCGTTTGAAGATCCTCTTCACCTCTCTTTGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGCCAGACTCCAGTGTTTCCTCGTATTTTTGGCCATGAAGCTGCAGGGATTGTTGAGAGCGTAGGCGAGGGTGTGACTCATCTGAAACCAGGAGACCATGCCCTCCCTGTATTCACAGGGGAGTGTGGGGAGTGCCCACACTGTAAATCAGAAGAGAGCAACTTGTGTGACCTGCTCAGGATCAACACTGATAGGGGTGTCATGATCAATGATGGCCACTCAAGGTTCTCTAAGAATGGAAAGCCCATATACCATTTCTTGGGAACCTCTACATTTAGTGAATACACTGTTCTCCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTGTTCTCAGTTGTGGGATTTGCACAGGTCTTGGTGCTACTGTAAATGTAGCAAAACCAAAACCTGGTTCCTCTGTTGCAATTTTTGGACTTGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCTTCAAGAATCATTGGAGTTGACTTAGTTTCCAGCCGATTTGAACTAGGTATAAATAATGCATTTTTTATCAAGATGTTTAAAGATTAA 747 0.4645 MSSTVGKVIKCRAAVSWEAGRPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAAGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNLCDLLRINTDRGVMINDGHSRFSKNGKPIYHFLGTSTFSEYTVLHAGCVAKINPAAPLDKVCVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELGINNAFFIKMFKD. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02570 248 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 236 IPR036291 -
Seca8g02570 248 SUPERFAMILY GroES-like 4 187 IPR011032 -
Seca8g02570 248 Gene3D - 183 235 - -
Seca8g02570 248 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Seca8g02570 248 Gene3D - 20 182 - -
Seca8g02570 248 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Seca8g02570 248 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Seca8g02570 248 PANTHER ALCOHOL DEHYDROGENASE 6 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02570 Seca-Chr8 58521982 58525328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02570 37 199 Monolignol Biosynthesis Gene Families AT4G37990 26.061 1.70e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02570 K18857 - gmx:100801918 442.58