Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02565 ATGGTCCCTCCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCTGTGTCGCCTTCCCTTTTGAGATCAAATTCAGGAATGTTGGGGGGTCAAGGTGGCCCTATGCCTTCACAGGCTTCCTTCCCTTCGCTGGTTTCACAGCGAACTCAGTATAACAACATGAACATGCTAGGCAGCATGTCCAATGTTACTTCCATACTGAACCAGTCTTTCCCAAATGGAATTCCGAATTCGGGGCTCTCTGGTCCTGGAAGTAGCCAGCGTGGTGGAGTTGATGCTGGGGCTGAACTGGATCCCCTGTCTGGTGTTGGCAATGGAATGGGCTTTGGCAACCCTTCATCATCTTTCGTGCAGTCGAATATGGTGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCAGGGTCAACAATTTTCAAATGCTTCTGGTAACCAGCTGTTGCCGGATCAACATCATTGTCAACAACTTGAAGTTCAAAATTTCCAACATAGTCAGCAGCAGTCAATGCAGCAGTTTTCAGCTCCTTTGAACACTCAGCAGCAGCAGCAGCATCATTTTCAATCAATTCGAGGAGGGATGGGTGGTGTTGGACCAGTGAAGTTGGAGCCCCAGGTAAGCAATGATCAGTTTGGGCAGCAGCCACAGCAACAGTTGCCATCATTGAGGAGTCTTACTCAGGTGAAAATGGAACCGCAACAGCTTCCACCAATGAGATCTCAGGCACCAGTAAAAATGGAGCCCCAGCATACTGATCAGCCATTTTTACATCAGCAGCAGCAACAGCAACAACAGCAGCAACAACTCCTTCAGATGTCAAGGCAATCCTCCCAGGCTGCTGCTGCGCAGATGAATCTTTTGCACCATCAGAGACTTTTGCAATTCCAGCAACATCAGCAACAACAGCTCTTAAAGGCAATTCCTCAACAACGGTCCCAGCTACCCCAGCAGTTTCAACAGCAGAATATGCCTATAAGGTCTCCTGTAAAACCAGCATATGAACCTGGGATGTGTGCTAGGCGGCTAACACATTACATGTATCAGCAACAACATAGACCGGAAGATAACAACATTGATTTCTGGAGGAAATTTGTTGCTGAGTATTTTGCCCCTAATGCCAAAAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATTTGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTTTATGTTGACATGCCTCGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGCCGCCATGAAGAGCTCATCCCCAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCATTCACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAAAATAATTGCAATATGTTCGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCAGAAGTAGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACGGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGTACAACAGTCCCAAGATCAATTACCACAGCAGCAGCATATGGTGGCCCATACCTCAAATGGTGATCAAAATTCCGTGCAAACTGCTGCCATGCAAATTGCTTCTAGCAATGGTGTGCCTAGTGTAAATAACACTGTCAATCCAGCATCTACATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAAAATTCTATGAATTCTAGACAACACTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGGTACCATCCCCAGGTTCTTCCAGTACGATGCCACAAGTGCAACCAAACCCATCCCCTTTTCAATCACCAACACCATCCTCATCTAACAACAACCCACAATCATCTCACCCCACCTTAACATCTGCAAATCACATGGGCACAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAGCAGACATCCATTTCTGGTGAAGCTGACCCTAGCGATGCTCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAATTGAATGGCACAGGAGGGATGGTAGGTGCTGGTTCTATTGGAAATGACATGAAAAATGTAAATGGGATTCTACCAGTGAGTAACAATACAGGGCTCAACAGTGGCAATGGCCTGGTGGGTAATGGGGCTGTGAACAGTAATTCTGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGCATGACCAATGGAATGAGACCTGCAATGGGAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTATTGCCCGGGAACAGGTTATGAATCATCAACAGGATTTGTCAAGCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCGTCTCCATGA 2730 0.4546 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGGQGGPMPSQASFPSLVSQRTQYNNMNMLGSMSNVTSILNQSFPNGIPNSGLSGPGSSQRGGVDAGAELDPLSGVGNGMGFGNPSSSFVQSNMVNPGSSGQGQGQGQQFSNASGNQLLPDQHHCQQLEVQNFQHSQQQSMQQFSAPLNTQQQQQHHFQSIRGGMGGVGPVKLEPQVSNDQFGQQPQQQLPSLRSLTQVKMEPQQLPPMRSQAPVKMEPQHTDQPFLHQQQQQQQQQQQLLQMSRQSSQAAAAQMNLLHHQRLLQFQQHQQQQLLKAIPQQRSQLPQQFQQQNMPIRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQVQQSQDQLPQQQHMVAHTSNGDQNSVQTAAMQIASSNGVPSVNNTVNPASTSTTTSTIVGLLHQNSMNSRQHSMNNASSPYGGSSVQVPSPGSSSTMPQVQPNPSPFQSPTPSSSNNNPQSSHPTLTSANHMGTANSPANISLQQQQTSISGEADPSDAQSSVQKIIHEMMMSSQLNGTGGMVGAGSIGNDMKNVNGILPVSNNTGLNSGNGLVGNGAVNSNSGVGVGGYGTMGLGPSGMTNGMRPAMGNNSIMNGRGGMASIAREQVMNHQQDLSSQLLSGLGAVNGFNNLQFDWKPSP. 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02565 909 MobiDBLite consensus disorder prediction 679 746 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 74 145 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 679 711 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 719 746 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 1 41 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 584 633 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 229 268 - -
Seca8g02565 909 Pfam LIM-domain binding protein 339 593 IPR029005 -
Seca8g02565 909 MobiDBLite consensus disorder prediction 250 268 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 160 187 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 12 26 - -
Seca8g02565 909 PANTHER LIM DOMAIN-BINDING PROTEIN 210 898 IPR029005 -
Seca8g02565 909 MobiDBLite consensus disorder prediction 752 771 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 160 216 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 597 633 - -
Seca8g02565 909 MobiDBLite consensus disorder prediction 107 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02565 Seca-Chr8 58033229 58044380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02565 1 905 C2H2 Transcription Factor Family AT1G43850 59.747 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02565 - - gmx:100798031 1342.02