Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02514 ATGAAAAATATTAGTATTCAAGCATTTAGCTTCGAGAAATTCAATTATACTTCCGATGATTTCAACAAGTGCAGTTATTCCTTTGTTAGCAAGAAAGACAACTATATTTTCTCTGTGAGTCATTTGAAGTATGGTCTCCCATTTAAGAAGGCTCCGCTTGTTGTTGATTGGAGTGTTAGAAACGTGACTTGTGAAATTTCCCAGCAGAGAGGAGACTATGCATGCAAGGCTAATAGCGATTGTCATAATTCAGCAACTGGATATGGTTACCAGTGCACATGTAAATCGGGTTTTGAGGGAAACCCATACCATCCGGATGGTTGTCGAGATATTGAAGAATGCAAGAGTGATAAGCACGACTGCATAAATGATAGTCTTTGTAAAGAAACTGAAGGGTCTTTTGAATGTTTTTGCCCTGATGGGCAAATTGGAGATGGAAAAAGGAAAGGTGCAGGAGATGGATGTCGGCAAAAGCAAAGAGGCGATGCAGTTACAAAGGTTACCATTGGTAAGCAAATAAGCACATTCGGGTTTTATCTTTGCTTTCTTATATTTATTATTATTTTTGCTTTCTTTAATTTGAAATATATACCAAAAAAGAAAACTCATCAAATTAAAGGAAAGGTTCTTTCGGCAACTAAAATAGAAGACTCCTCCCAGTCTACTAAAATGTTCACAGCAGAGCAACTTAAGAAGGCCACCAATAATTATGATGAAAGCTTAATCAATGGTAGAGGAGGTTATGGTACAGTTTACAAAGGATTTCTATCAGATAGTAGGATTGTTGCTATCAAGAAGTCGAAAGTAGTGGATCAAAGCCAAATTGAACAATTCATTAATGAGGTGGTTGTGCTTTCACAAATTAATCATAGGAATGTGGTCAAACTCTTGGGTTGTTGTTTAGAGACAGAAATCCCTTTACTAGTTTATGAATTTGTTAACAATGGTACTCTTTATGATTATTTACACAGTGAATTAGGAGAGGCAACTTATGTCTCTTGGAAAACTCGTCTAAGGATAGCAGCAGAGGCAGCTGGGGCTCTATCTTACCTTCACTCAGCAGCCTCAATACCCATTATCCATAGAGATGTGAAGAGTGCAAACATTCTCTTGGATGACACTTACACTGCTAGAGTGTCTGATTTTGGAGCTTCAAGATTGATTCCTCTTGATCAAACAGAACTAGCAACAATGGTGCAAGGAACCCTTGGTTACCTGGATCCAGAGTACATGCTAACAAGCCAACTCACTGTGAAAAGTGATGTGTATAGCTTTGGAGTAGTGCTTGTAGAGCTGCTAACAGGAGAGAAGCCTCTTTGTTTTGAAAGGCCAGAAGAGAAAAGAAGTCTTGCTATGCACTTTCTATCTTGCTTGAAAGAGGATCGCTTGTTTGAAGTTATTCAAGATGGTATTTTGAATGTAGAAAATATGCAGGAGATCAAGGAGGTTGCTTTTCTAGCAACAAAATGTTTAAGACTAAGAGGGGAGGAAAGGCCAAGCATGAAAGAAGTGGCAATGGAGTTGGAAGGAATAAGGCTAATGGACAAGCACACATGGACCAGTACAGACCAAAATTTGGAGGAGACCGAGTTCTTGCTTCAAAGGGCATCCAACAGTCATGAACATGGTGATAGTAGTTCCTACCAAAATACTATGTATGACAGCTTGAGAGACCATGTACTAATTGCCTTTGATGATGGAAGATGA 1707 0.3866 MKNISIQAFSFEKFNYTSDDFNKCSYSFVSKKDNYIFSVSHLKYGLPFKKAPLVVDWSVRNVTCEISQQRGDYACKANSDCHNSATGYGYQCTCKSGFEGNPYHPDGCRDIEECKSDKHDCINDSLCKETEGSFECFCPDGQIGDGKRKGAGDGCRQKQRGDAVTKVTIGKQISTFGFYLCFLIFIIIFAFFNLKYIPKKKTHQIKGKVLSATKIEDSSQSTKMFTAEQLKKATNNYDESLINGRGGYGTVYKGFLSDSRIVAIKKSKVVDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEIPLLVYEFVNNGTLYDYLHSELGEATYVSWKTRLRIAAEAAGALSYLHSAASIPIIHRDVKSANILLDDTYTARVSDFGASRLIPLDQTELATMVQGTLGYLDPEYMLTSQLTVKSDVYSFGVVLVELLTGEKPLCFERPEEKRSLAMHFLSCLKEDRLFEVIQDGILNVENMQEIKEVAFLATKCLRLRGEERPSMKEVAMELEGIRLMDKHTWTSTDQNLEETEFLLQRASNSHEHGDSSSYQNTMYDSLRDHVLIAFDDGR. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02514 568 FunFam Wall-associated receptor kinase 2 313 531 - -
Seca8g02514 568 SUPERFAMILY Protein kinase-like (PK-like) 217 509 IPR011009 -
Seca8g02514 568 ProSiteProfiles Protein kinase domain profile. 237 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02514 568 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 521 IPR045274 GO:0007166
Seca8g02514 568 Gene3D Phosphorylase Kinase; domain 1 198 312 - -
Seca8g02514 568 CDD STKc_IRAK 244 511 - -
Seca8g02514 568 SMART serkin_6 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02514 568 Pfam Calcium-binding EGF domain 110 141 IPR001881 GO:0005509
Seca8g02514 568 Pfam Protein kinase domain 244 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02514 568 ProSiteProfiles EGF-like domain profile. 110 145 IPR000742 -
Seca8g02514 568 CDD EGF_CA 110 145 - -
Seca8g02514 568 FunFam Wall-associated receptor kinase 2 208 312 - -
Seca8g02514 568 SMART egf_5 113 156 IPR000742 -
Seca8g02514 568 SMART egf_5 63 109 IPR000742 -
Seca8g02514 568 FunFam Fibrillin 2 105 149 - -
Seca8g02514 568 Gene3D Laminin 112 148 - -
Seca8g02514 568 Gene3D Laminin 63 111 - -
Seca8g02514 568 Gene3D Transferase(Phosphotransferase) domain 1 313 536 - -
Seca8g02514 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Seca8g02514 568 SUPERFAMILY EGF/Laminin 110 145 - -
Seca8g02514 568 SMART egfca_6 110 156 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02514 Seca-Chr8 55748326 55757792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02514 4 568 Receptor kinase-like Gene Family AT1G21230 49.567 4.23e-176 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca8g02514 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02514 - - gmx:100819535 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02514 8 55748326 55757792 Seca8g02514 8 55748326 55757792 ECH
Seca8g02514 8 55748326 55757792 Seca8g03455 8 99044332 99046173 PCT