Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02503 ATGTCTAGCACAGCTGGTAAGGTGATCAAGTGCAGAGCTGCGGTGGCATGGGAGCCAGGGAAGGCTCTAGCGATAGAGACAATAGAGGTAGCACCACCACAAAGAGGTGAAGTGCGTTTGAAAATACTCTACACCTCCCTTTGTCGTACTGATGTTTACTGGTGGGATACTAAGGACCAGAATCCACTGTTTCCTCGTATCTTAGGTCATGAAGCTAGTGGGATTGTGGAGAGTGTAGGAGAGGGTGTGACTGATCTCAAACCAGGTGACCATGCCCTGCCAATTTTCACTGGAGAGTGTGGGGATTGTGCACACTGTAAATCAGATGAGAGCAATATGTGTGAGCTTCTCAGGATCAACACTGATAGAGGAGTTATGCTCAGTGATGGCAAAACAAGATTCTCCAAAAATGGACAACCCATATACCATTTTGTTGGAACCTCTACATTCAGTGAATACACTGTTGTTCATGCTGGATGTGTTGCAAAAATTAACCCTGCTGCCCCACTTGACAAAGTTTGTATTGTCAGCTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCGAAGCCTAATTCCTCTGTTGCTGTCTTTGGATTAGGAGCTGTTGGTCTTGCTGCCTGTGAAGGGGCAAGGGTTTCTGGTGCATCTAAAATCATTGGGGTTGATTTAGTTCCCGGCCGATTTGAACCAGCCAAAAAATTTGGGGTCACTGACTTTGTCAACCCAAAAGATCATAACAAACCTGTACAACAGGTCATTGCTGAAATGACTAATGGAGGAGTGGATCGTGCTGTTGAGTGTACCGGAAACACCCAAGCTTCAATTTCAGCATTTGAATGTGTTCATGATGTATTTTCTTGA 876 0.4486 MSSTAGKVIKCRAAVAWEPGKALAIETIEVAPPQRGEVRLKILYTSLCRTDVYWWDTKDQNPLFPRILGHEASGIVESVGEGVTDLKPGDHALPIFTGECGDCAHCKSDESNMCELLRINTDRGVMLSDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAGCVAKINPAAPLDKVCIVSCGFCTGFGATVNVAKPKPNSSVAVFGLGAVGLAACEGARVSGASKIIGVDLVPGRFEPAKKFGVTDFVNPKDHNKPVQQVIAEMTNGGVDRAVECTGNTQASISAFECVHDVFS. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02503 291 SUPERFAMILY GroES-like 4 186 IPR011032 -
Seca8g02503 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 287 IPR036291 -
Seca8g02503 291 Gene3D - 20 182 - -
Seca8g02503 291 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Seca8g02503 291 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Seca8g02503 291 FunFam S-(hydroxymethyl)glutathione dehydrogenase 183 291 - -
Seca8g02503 291 PANTHER ALCOHOL DEHYDROGENASE 6 288 - -
Seca8g02503 291 Pfam Zinc-binding dehydrogenase 206 287 IPR013149 -
Seca8g02503 291 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Seca8g02503 291 Gene3D - 183 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02503 Seca-Chr8 55190147 55194330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02503 1 252 Monolignol Biosynthesis Gene Families AT1G72680 26.087 4.19e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02503 K18857 - gmx:100775490 523.087