Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02484 ATGGCATCGGATTTTAGTTTGGACAATAATCAAAGCAGTGAAATTGGACTTGGTACCACAGAGGACATTCCTCTGCCACAATCGACTGAGCTAAATGAATGGGTGCCAGAGTGTGATGAAGAATTTAAGCCTAAAATAGGAAAGATATTTGATACATTAAAAGATGGTGAAGAATTTTATAAAAGATATGCACATGGTGTTGGATTTAGCGTGCGTTGCTCATCAGAAAGTAAAAACAAAGACGGAGTAAAGCGCTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACAATCCAGATAAAGCAAAAAATGTGGAGCCAACCAACAGTTAA 330 0.3727 MASDFSLDNNQSSEIGLGTTEDIPLPQSTELNEWVPECDEEFKPKIGKIFDTLKDGEEFYKRYAHGVGFSVRCSSESKNKDGVKRWKYFVCSKEGYNPDKAKNVEPTNS. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02484 109 MobiDBLite consensus disorder prediction 1 26 - -
Seca8g02484 109 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 104 - -
Seca8g02484 109 Pfam FAR1 DNA-binding domain 58 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02484 Seca-Chr8 54080645 54081315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g02484 FAR1 5.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02484 - - ccaj:114916444 129.413