Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02414 ATGTCTACACACGACGAGTCAGATAACAACGACACGAAGCACCAGGAGAACAACAAGAAGAAACCGTTCGATGCTGTAGAACCGAGTTCGCTTCCCCTGAACGAACTTAGGTCAACCTTCGCTTCCGGCAAAACGCGAAGCTATGAGTGGAGAGTTTCGCAGCTTAACGCACTCATCAAGCTCACCAACGACCACGAGCAACAGATCATCGATGCTCTTCGAAACGACCTCGATAAGCCGCCGCTCGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAATTCATGTAAAGTGGCACTCAAGCAATTGAAACATTGGATGGCTTCAGAGAAGGTCAAAACTTCACTCGCAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTCTGTATGTTAAATGTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCTGCTGGTAATGCTGTGGTTCTAAAACCATCAGAAATATCTCCAGCCTCATCATCACTGCTTGCAAAATTGCTAGGGGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGCGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTGGGGCGCATTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTATTGTTGATTCAAATATCAACTTACAGGTAGCAATTAGACGGATAATTGCTGGAAAGTGGGGTTGTAACAATGGACAAGCTTGCATCTCCCCAGATTATATTATAACAACCAAGGACTATGCTCCTAAGTTGGTGGATGCACTAAAGATTGGATTGGAGAAATTTTACGGAAAGAACCAATTGGAATCAAAAGATTTGTCCCGGATTGTGAATTCCAACCACTTTGCTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTAGCCCCACTCTTCTATTGGATGTCCCACGAGATTCTCTTATAATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATCCTCACGGTCGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCTGGACCAAAGCCTCTCGCTGCATATTTATTTACAACCAACAAAAAGCTCAAGGAGCGGTTTGTTATGACTGTTTCTGCTGGCGGTTTGGCTGTCAATGACACTGCTGTACATCTTGCAGTTCATACTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTGGGTTCATACCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAAGCAGTTCTTTATCGCGGTTTTATGGGTGATGCATCAATAAGGTACCCACCATACACAAATACAAAGATGAGATTGCTGAAGGCTCTCATTGGTGGTGGCATACTTGGTATAATTCGTGCCCTGTTTGGATTGTCCTAG 1518 0.4321 MSTHDESDNNDTKHQENNKKKPFDAVEPSSLPLNELRSTFASGKTRSYEWRVSQLNALIKLTNDHEQQIIDALRNDLDKPPLETVAYEIAMLKNSCKVALKQLKHWMASEKVKTSLATFPSSAEIVSEPLGVVLVISAWNYPFCMLNVLSLDPVIGAIAAGNAVVLKPSEISPASSSLLAKLLGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVIVDSNINLQVAIRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKIGLEKFYGKNQLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGEKDESKLRISPTLLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFDVINSGPKPLAAYLFTTNKKLKERFVMTVSAGGLAVNDTAVHLAVHTLPFGGVGESGVGSYHGKFSFDAFSHKKAVLYRGFMGDASIRYPPYTNTKMRLLKALIGGGILGIIRALFGLS. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02414 505 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 238 245 IPR029510 GO:0016491
Seca8g02414 505 SUPERFAMILY ALDH-like 36 478 IPR016161 GO:0016491
Seca8g02414 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 460 IPR016162 GO:0016491
Seca8g02414 505 MobiDBLite consensus disorder prediction 1 29 - -
Seca8g02414 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 242 442 IPR016163 GO:0016620
Seca8g02414 505 FunFam Aldehyde dehydrogenase 242 442 - -
Seca8g02414 505 FunFam Aldehyde dehydrogenase 37 245 - -
Seca8g02414 505 PIRSF ALDH 9 495 IPR012394 GO:0006081
Seca8g02414 505 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g02414 505 Pfam Aldehyde dehydrogenase family 44 462 IPR015590 GO:0016491
Seca8g02414 505 PANTHER ALDEHYDE DEHYDROGENASE 33 492 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02414 Seca-Chr8 51592528 51599095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02414 89 505 Aldehyde Dehydrogenase Gene Family AT1G44170 75.300 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02414 K00128 - gmx:100778722 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02414 8 51592528 51599095 Seca8g02414 8 51592528 51599095 ECH