Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02413 ATGGTTAGGGATCTGAGAGTGACGTTTGAGTCTGCCAAGACTCGGAGCTACGAATGGAGAGCTTCCCAGTTGAAGGCCCTTATGGAGTTAACTGAAAAGCACGACAAAGAGATCGTTCGAGCTCTTCACTCTGACTTATCCAAATCTGAAACAGAATCCTTCATCCAAGAGGTACAATCTCGCACTCTAAACTAA 195 0.4513 MVRDLRVTFESAKTRSYEWRASQLKALMELTEKHDKEIVRALHSDLSKSETESFIQEVQSRTLN. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02413 64 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 7 59 IPR016162 GO:0016491
Seca8g02413 64 PANTHER ALDEHYDE DEHYDROGENASE 2 59 IPR012394 GO:0006081
Seca8g02413 64 SUPERFAMILY ALDH-like 2 59 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02413 Seca-Chr8 51557485 51557679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02413 1 60 Aldehyde Dehydrogenase Gene Family AT4G34240 43.333 3.14e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02413 K00128 - pvu:PHAVU_001G0727000 85.8853