Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02406 ATGGTACAAGAGACTTTTGGTTACTTGGATCCAGAATACATGCAAACAAGTAGACTCACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTGCTTTTGGAGCTATTATCAGGGAGAAAGGCTCTCTCATTTCAGAGGCCGAAAGAAGAAAGAAGTCTTGCATTGCACTTTCTCTCTTGCTTGGAAGATGAACGTTTGTTTGAAATTCTTGAATTTGGTTTTTTGAATGAAGGGAATAAGGAGGAGATTATGGGAGTTGCTATTCTTGCAAGTAAGTGCTTAAGGCTTAATGGGGAGGAGAGGCCTAGCATGGAGGAAGTGGAAATGGAGTTGAAGAGTATAAGGCAAATACAAAAGCACCCTTGGACAAATACATAA 378 0.3995 MVQETFGYLDPEYMQTSRLTEKSDVYSFGVVLLELLSGRKALSFQRPKEERSLALHFLSCLEDERLFEILEFGFLNEGNKEEIMGVAILASKCLRLNGEERPSMEEVEMELKSIRQIQKHPWTNT. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02406 125 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 118 IPR045274 GO:0007166
Seca8g02406 125 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Seca8g02406 125 Pfam Protein kinase domain 4 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02406 125 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02406 125 SUPERFAMILY Protein kinase-like (PK-like) 4 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02406 Seca-Chr8 51332616 51332993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02406 1 124 Receptor kinase-like Gene Family AT1G21240 54.400 5.02e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca8g02406 Pkinase 1.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02406 - - gmx:100778914 188.734