Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02403 ATGACCACGCAACAACTGATCACCCTGGTGTTAATGATTGCAATATTAGTAACTGTGGAAGGAGCAGCAGCACTTGATAATAACGCCCTACCTGGTTGCATAGACACATGTGGTAATGTTTCAATTCCATATCCATTTGGCGTAGGCAAATCTTCTAAAACAGGTGATGTGAACTGTTTCTTGGAAGAAAGGTTGAACCTTACCTGCAATAATAACACTTTATATCACGGGAATGTCCAAGTTTTAAACATAAGCCTCAAAGGCCAATTGGACATGATGTTTTATGTCTCAATGCTTTGCAATGATACCAAAAATGGAGTGGCTAATGAGCCCTATCTACGCACTCCTGCTTTCACCATTTCTAACAAAGACAACAAGTTCGTAAGTGTTGGCTGCGACACCTACGGCTATCTCAATAGCTTTCGCGACGGGGAAGAGTATTCAACCGGATGCATAACAAGATGTAGCAAGTTACCTAATACGGTAATCGATGGACAGTGTTCGGGAATAGGGTGTTGCCAGGTGGATATTCCTTCTGAAATGAAGAATATCACTTTACAAACCTACAGGTTTAACTCTATGAACTTCACCGGCTGTAGCTATTCCTTTGTTGCCAAACAAGGCTCCTATAACTTTTCCGTCAGTCATTTAAAGAACCACCTGCCTTTCGCCCAGCTTCCTATGGTTGTTGATTGGACGGTTGGAGACGAGTCATGTGAATTTTTCCAGAAGAATAATGGACAGAAAAGTGCCTGCATGAATAATAGCTATTGTGACGACGGTGACACTAGTTATGGATACCGGTGTACATGTAAATCTGGTTATGATGGAAACCCATACCATCCCAATGGTTGCCAAGACATTGACGAATGCAAGACAAAAAATCATACTTGCATTAATGATCTTCATTGTCATAACATTGATGGATCTTACGAATGTTTTTGTCCTCGTGGGCAAGTTGGAAATGGAAGAAATATCACAGGAGGATGCCAACCAATCCGGCACGAAAGTATACTTACCAAGGTAGCCATTGGTGCATGTGCTGGACTTATAGCTCTATTGGGTACTTCCTGGTTATACTTAATCTATCAAAAAAGGAAACTCACAAAACAAAGAGAGAAATTCTTTCAACAAAATGGTGGTTTCATTTTGCAACGAAGACTCTCTTCAAGAGAAGACTCCCATCAAATTGCTCAAATTTTCACAGCTGAAGAGCTGAAAAAGGCGACCAACAACTACAATGAGAGCTTAATCATTGGAAAAGGAGGTTTTGGTACAGTTTTCAAAGGATTTCTTGCTAATAATAGGATTGTTGCTGTGAAGAAGTCCAAGGTAGTGGATCAAAACCAAGCTGAGCAATTCATCAACGAAGTGATTATTCTATCCCAAATCAATCACAGGAACGTGGTAAAACTCTTGGGTTGTTGTTTAGACACTGAAGTCCCATTATTGGTTTATGAATTTGTTAACAATAGTACCCTTTATGATCACTTACACAATGAAAGCAAGATAGGTAATCTCACTTGGAAGACCCGTCTAAGAATAGCTATAGAGACAGCTGGAGCATTATCATATTTGCATTCAGATGCTTCAATAACCATTATCCATAGGGATGTGAAGAGTTCCAACATTCTTTTGGATGACAATTATACTGCTAAAGTGTCTGATTTTGGAGCTTCAAAGTTGGTTCCACTTGATCAAGCTGAATTAGCCACAATGGTACAAGGGACATTCGGTTACTTGGACCCTGAGTACATGCAAACAAGTAGGCTCACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTGCTTGTAGAACTTTTAACAGGGCAGAAAGCAGTTTCATTTCAGAGGCCAGAAGAAGAAAGAAGTCTTGCCCTGCATTTTCTGTCTTACTTGGAAGATGGTAGATTGTTTGAAATTCTTGATTTTGGTCTTTTGAATGAAGAAAATAGGGAGGAGATTCAGGAAGTTGCTATTCTTGCAAGCAAGTGCATGAGACTTAAAGGGGAGGAGAGGCCTAGCATGAAGCAAGTGGAAATTGAGCTGAAGGGAATAAGGAAAACAGAGAAGCACCCATGGACCAATATAGACCTGAATTTGGAGGAGTCTCAATACTTACTTCCTGAGGTATCTGGCATTTATAGGCATGGTGATAGCAGCAACTATGGAAATACTGAGTATGATAGTTTGAGGGACCATGTACAAGTTTCCTTTGATATTGCACGTTAA 2232 0.401 MTTQQLITLVLMIAILVTVEGAAALDNNALPGCIDTCGNVSIPYPFGVGKSSKTGDVNCFLEERLNLTCNNNTLYHGNVQVLNISLKGQLDMMFYVSMLCNDTKNGVANEPYLRTPAFTISNKDNKFVSVGCDTYGYLNSFRDGEEYSTGCITRCSKLPNTVIDGQCSGIGCCQVDIPSEMKNITLQTYRFNSMNFTGCSYSFVAKQGSYNFSVSHLKNHLPFAQLPMVVDWTVGDESCEFFQKNNGQKSACMNNSYCDDGDTSYGYRCTCKSGYDGNPYHPNGCQDIDECKTKNHTCINDLHCHNIDGSYECFCPRGQVGNGRNITGGCQPIRHESILTKVAIGACAGLIALLGTSWLYLIYQKRKLTKQREKFFQQNGGFILQRRLSSREDSHQIAQIFTAEELKKATNNYNESLIIGKGGFGTVFKGFLANNRIVAVKKSKVVDQNQAEQFINEVIILSQINHRNVVKLLGCCLDTEVPLLVYEFVNNSTLYDHLHNESKIGNLTWKTRLRIAIETAGALSYLHSDASITIIHRDVKSSNILLDDNYTAKVSDFGASKLVPLDQAELATMVQGTFGYLDPEYMQTSRLTEKSDVYSFGVVLVELLTGQKAVSFQRPEEERSLALHFLSYLEDGRLFEILDFGLLNEENREEIQEVAILASKCMRLKGEERPSMKQVEIELKGIRKTEKHPWTNIDLNLEESQYLLPEVSGIYRHGDSSNYGNTEYDSLRDHVQVSFDIAR. 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02403 743 ProSiteProfiles EGF-like domain profile. 243 286 IPR000742 -
Seca8g02403 743 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Seca8g02403 743 Pfam Calcium-binding EGF domain 287 319 IPR001881 GO:0005509
Seca8g02403 743 Gene3D Phosphorylase Kinase; domain 1 381 488 - -
Seca8g02403 743 SMART egfca_6 287 331 IPR001881 GO:0005509
Seca8g02403 743 CDD EGF_CA 287 321 - -
Seca8g02403 743 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Seca8g02403 743 SUPERFAMILY Protein kinase-like (PK-like) 394 680 IPR011009 -
Seca8g02403 743 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Seca8g02403 743 Gene3D Transferase(Phosphotransferase) domain 1 489 704 - -
Seca8g02403 743 CDD STKc_IRAK 419 686 - -
Seca8g02403 743 Pfam Wall-associated receptor kinase galacturonan-binding 33 89 IPR025287 GO:0030247
Seca8g02403 743 FunFam Fibrillin 2 282 327 - -
Seca8g02403 743 SMART egf_5 290 331 IPR000742 -
Seca8g02403 743 SMART egf_5 238 286 IPR000742 -
Seca8g02403 743 ProSitePatterns Calcium-binding EGF-like domain signature. 287 313 IPR018097 GO:0005509
Seca8g02403 743 Gene3D Laminin 237 327 - -
Seca8g02403 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Seca8g02403 743 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02403 743 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 690 IPR045274 GO:0007166
Seca8g02403 743 ProSiteProfiles Protein kinase domain profile. 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02403 743 FunFam Wall-associated receptor kinase 2 383 488 - -
Seca8g02403 743 SMART serkin_6 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02403 743 FunFam Wall-associated receptor kinase 2 489 706 - -
Seca8g02403 743 SUPERFAMILY EGF/Laminin 286 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02403 Seca-Chr8 51238027 51242450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02403 10 743 Receptor kinase-like Gene Family AT1G21230 45.140 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca8g02403 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02403 - - gmx:100819535 918.302