Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02393 ATGACAAGTAGATATGATTATATCAAAGATGTTGGTGTGGGTTCTGAAAATAAGATATGGAAAATCAAAGTTAGGGTAATTCGCCTTTGGAGATCAGCAAGTTTTAAAGTCAGCTCAAATAAACCAATGATTGAAATGGTGGTTTTGGATGAAGAGGGAGGACGTATCCAATGCACCGTGAAGAGCATTCATGTTTATTTGTTTGAAGGTGTTCTTTTGGGGGGTAGTGTCTACATGTTAGAGAACTTTTCAGTTGCACTTAACAGTGCAAAATTCAAACCAACCATGCATGAATTTAGATTGTTTTTCAAAAGGGAAACTCAAGTCCGATTGATTGAGGATTCATCCATTCCAATGAATGGTTTTTCTTTTGTTGATTTTTCTGAAATTTTGAATGAGAAGAATGAGGAGAGTCGTTTGGTTGGTAAGTAG 432 0.3588 MTSRYDYIKDVGVGSENKIWKIKVRVIRLWRSASFKVSSNKPMIEMVVLDEEGGRIQCTVKSIHVYLFEGVLLGGSVYMLENFSVALNSAKFKPTMHEFRLFFKRETQVRLIEDSSIPMNGFSFVDFSEILNEKNEESRLVGK. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02393 143 Gene3D - 8 115 IPR012340 -
Seca8g02393 143 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Seca8g02393 143 CDD RPA1_DBD_A_like 21 109 - -
Seca8g02393 143 SUPERFAMILY Nucleic acid-binding proteins 5 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02393 Seca-Chr8 50768816 50769341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02393 20 135 Core DNA Replication Machinery Family AT2G06510 30.894 2.03e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02393 - - adu:110274503 171.4