Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02369 ATGGATGATCCCAGAGACCAGTTTCCTATAGGAATGCGTGTTCTTGCTGTTGATGATGACCCAACATGTCTCATGGTTTTGGAGACTCTGCTCAGAAGATGTCAATACAATGTAACTGCAACTAAAAATGCAATATCGGCACTGAAATTGTTGAGAGAAAACAAGAATAGGTTTGACTTGGTAATCAGTGATGTTCACATGCCAGACATGGATGGCTTTAAGCTGCTTGAGCTTGTGGGTCTTGAGATGGACCTACCTGTCATAATGTTGTCTGTAAATGATGACCAAAAGATGGTGATGAAGGGAATAACTCATGGAGCTTTTGATTATTTGCTGAAACCTGTCAGAATTGAGGAGTTACAGAACATTTGGCAGCATGTAATAAGGAGGAAGAAGATTGACTTGAAGGAGCTGAACAAAACCAGCAACGAAGACACACTTAATTCTTGTAACAACAATGGACAAGGATCAGCACCAACAACAAATTCAGATCAAAATGAAAAGCCATCCAAAAAAAAGAAAGGATCATGA 531 0.3955 MDDPRDQFPIGMRVLAVDDDPTCLMVLETLLRRCQYNVTATKNAISALKLLRENKNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNDDQKMVMKGITHGAFDYLLKPVRIEELQNIWQHVIRRKKIDLKELNKTSNEDTLNSCNNNGQGSAPTTNSDQNEKPSKKKKGS. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02369 176 MobiDBLite consensus disorder prediction 143 165 - -
Seca8g02369 176 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Seca8g02369 176 MobiDBLite consensus disorder prediction 143 176 - -
Seca8g02369 176 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Seca8g02369 176 CDD REC_typeB_ARR-like 14 128 - -
Seca8g02369 176 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 162 IPR045279 GO:0009736
Seca8g02369 176 Gene3D - 12 165 - -
Seca8g02369 176 SMART REC_2 12 124 IPR001789 GO:0000160
Seca8g02369 176 SUPERFAMILY CheY-like 11 133 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02369 Seca-Chr8 50340942 50342776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02369 6 174 Response Regulator Gene Family AT2G25180 66.272 2.08e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca8g02369 Response_reg 5.8e-26 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02369 - K14491 gmx:100777171 295.434