Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02368 ATGATGAAGATGGAGTTGCACTGCAAGTTTGTTTCTGCTGTTAATCAATTAGGCATTGACATGTCATTTTGGTTGCAGAGGCTGTACCTAAAAAAATTCTTAGATTTAATGAATGTTGAAAAGCTCACAAGGAAAAATGTGAAATATAGACTTTATCTGAAAAGAATCAGCTGTCAAGTAAACCAACAAGCTAATATGGTGGCAGCCTTAGGTGGTGTAGATACATCCTATTTGGGAATGGGTTCTCTAAGTGGGGTTAGACATTTGCAGTCATTGAGTGGTTCTAGACAGTATCATAACAACCCTTTCAGACCCTTTGCACCTGGTGGGATGATGAGTAGATTGAACACTCCTGCTAGTCTGAATTTTCATGGGTTGTCTTCTTGTGGATCTCTTTAG 399 0.3885 MMKMELHCKFVSAVNQLGIDMSFWLQRLYLKKFLDLMNVEKLTRKNVKYRLYLKRISCQVNQQANMVAALGGVDTSYLGMGSLSGVRHLQSLSGSRQYHNNPFRPFAPGGMMSRLNTPASLNFHGLSSCGSL. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02368 132 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 5 69 IPR044841 GO:0003700|GO:0006355
Seca8g02368 132 Gene3D - 3 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02368 Seca-Chr8 50340119 50340878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02368 4 128 Response Regulator Gene Family AT2G25180 46.970 2.79e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca8g02368 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02368 - K14491 gmx:100803879 164.466