Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02346 ATGGATGATCCCAGAGACCAGTTTCCTATAGGAATGCGTGTTCTTGCTATTGATGATGACCCAACATGTCTCATGGTTTTGGAGACTCTGCTAAGAAGATGTCAATACAATGACATGGATGGCTTTAAGCTGCTTGAGCTTGTGGGTCTTGAGATGGACCTACCTGTCATAACCTTAGGTGGTGTAGATACATCCTATTTGGGAATGGGTTCTCTAAGTGGGGTTAGACATTTGCAGTCATTGAGTGGTTCTAGACAGTATCATAACAACCCTTTCAGACCCTTTGCACCTGGTGGGATGATGAGTAGATTGAACACTCCTGCTAGTCTGAATTTTCATGGGTTGTCTTCTTGTGGATCTCTTTAG 366 0.4344 MDDPRDQFPIGMRVLAIDDDPTCLMVLETLLRRCQYNDMDGFKLLELVGLEMDLPVITLGGVDTSYLGMGSLSGVRHLQSLSGSRQYHNNPFRPFAPGGMMSRLNTPASLNFHGLSSCGSL. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02346 121 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 37 IPR045279 GO:0009736
Seca8g02346 121 SUPERFAMILY CheY-like 11 64 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02346 Seca-Chr8 50105733 50107223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02346 6 77 Response Regulator Gene Family AT4G31920 48.077 4.58e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02346 - K14491 jre:109012848 100.523