Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02342 ATGATAGAAGATGTGAGTAAGATAAAAGCTGCAGGAGGGGTTCCAGTTCCTGCATATCATTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGGTCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACCCAAAAGGCCGAGAAAGGTATAGTTTTACATTCTTTTCTGGCTATTGATTATCTTGTTTTGGTTCACATGGATTTCAGACGTTTTCTTATGGGAGTTTCGAAGTACGACAAAGGGCACTGGAAAAACATCGCTCACCATTATGTAATCACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTACCTAAGGCAAAACCTTTCTGGAGGGAAAAGGAAGAGGTCTAGTATCCATGATATCACTACTGATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTATTTTGTTCGATGAGTCTCACATGCCAAATGTGCAACCACAAAAAGGGATTAATCACCACAATGTGTTAGAGCCACTCATGCAGGTTTTCAACCCAAATTATGATGATATGTTCTTGTCTTCCTCATATGACATCTATTCCGAGTTTCAAGTTCTGGAAGATCTATACAACTGTGCTTTTCATCACCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCAACATGGACCCTACTTTTGGTATTCATGCACCGTGA 723 0.4177 MIEDVSKIKAAGGVPVPAYHFSMEMVDNLQGHDGCKKRSATAKERKKGVRWTKEEHTQKAEKGIVLHSFLAIDYLVLVHMDFRRFLMGVSKYDKGHWKNIAHHYVITKTPTQVASHAQKYYLRQNLSGGKRKRSSIHDITTDNLKTSGQDKPAILFDESHMPNVQPQKGINHHNVLEPLMQVFNPNYDDMFLSSSYDIYSEFQVLEDLYNCAFHHPYAQQGFTMASNDFNMDPTFGIHAP. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02342 240 PANTHER TRANSCRIPTION FACTOR KUA1 2 170 - -
Seca8g02342 240 SUPERFAMILY Homeodomain-like 83 125 IPR009057 -
Seca8g02342 240 Gene3D - 79 126 - -
Seca8g02342 240 Pfam Myb-like DNA-binding domain 84 120 IPR001005 -
Seca8g02342 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 125 IPR017930 -
Seca8g02342 240 NCBIfam myb-like DNA-binding domain, SHAQKYF class 83 124 IPR006447 GO:0003677
Seca8g02342 240 CDD SANT 81 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02342 Seca-Chr8 50083187 50083982 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02342 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02342 - - gmx:778063 188.348