Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02312 ATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGGCCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACACGTTTTCTGATGGGAGTTTCGAAGTATGGCAAAGGGCACGGGAGAGATATCGCTCACAATTATGTAATCACAAAGACTCCTACCCTAGTGGCAAGCCATGCTCAAAAGCACTACATAAGGCAAAACCTTTCTGGAGGGAAAAGGAAGAGATTTAGTATCCATGATATCACCATTGATAACCTTAAAACTTCAGGTCAAAACAAGCCAGCTATTTTGTTCAATGAGACTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCACCACAATGTGTTAGAGCCACTCATGCAGAATGAAGAGCCAGTTTATGATGATATGTTCTTGTCTTCCTCATATGACATCTATTCCGAGTTTCAAGTTCTGGAAGATCTATACAACTGTGTTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCGACTGTGCTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAGTGGCTTCTAATGAATTCAACAACATTAGATGA 612 0.4199 MVDNLQGHDGCKKRPATAKERKKGVRWTKEEHTRFLMGVSKYGKGHGRDIAHNYVITKTPTLVASHAQKHYIRQNLSGGKRKRFSIHDITIDNLKTSGQNKPAILFNETHMPNVQPQEGINHHNVLEPLMQNEEPVYDDMFLSSSYDIYSEFQVLEDLYNCVFHQPYAQQGFTMASNDFDCAFHQPYAQQGFTVASNEFNNIR. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02312 203 MobiDBLite consensus disorder prediction 1 26 - -
Seca8g02312 203 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 74 IPR006447 GO:0003677
Seca8g02312 203 PANTHER TRANSCRIPTION FACTOR KUA1 16 121 - -
Seca8g02312 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
Seca8g02312 203 SMART sant 23 73 IPR001005 -
Seca8g02312 203 Gene3D - 25 76 - -
Seca8g02312 203 Pfam Myb-like DNA-binding domain 26 70 IPR001005 -
Seca8g02312 203 SUPERFAMILY Homeodomain-like 21 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02312 Seca-Chr8 49861695 49862509 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02312 Myb_DNA-binding 4.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02312 - - gmx:100783469 169.859