Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02306 ATGGTAGAAGATGTGAGTAAGATAAAAGCTGCAGGAGGGGTTCCAGTTCCTGCATATCCTTTCTCCACGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGGTCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACCCAAAAGGCCGAGAAAGGTATAGTTTTACATTCTTTTCTGGCTATTGATTATCTTGTTTTGGTTCACATGGATTTCAGACGTTTTCTTATGGGAGTTTCGAAGTACGACAAAGGGCACTGGAAAAACATCGCTCACCATTATGTAATCACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTACCTAAGGCAAAACCTTTCTGGAGGGAAAAGGAAGAGGTCTAGTATCCATGATATCACTATTGATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTATTTTGTTCGATGAGTCTCACATGCCAAATGTGCAACCACAAAAAGGGATTAATCACCACAATGTGTTAGAGCCACTCATGCAGAATGAAGAGCCACTCATGCAGGTTTTCAACCCAAATTATGATGATATGTTCTTGTCTTCCTCATATGACATCTATTCTGAGTTTCAAGTTCTGGAAGATCTATACAACTGTGCTTTTCATCACCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCAACATGGACCCTACTTTTGGTATTCATGCACCGTGA 744 0.4207 MVEDVSKIKAAGGVPVPAYPFSTEMVDNLQGHDGCKKRSATAKERKKGVRWTKEEHTQKAEKGIVLHSFLAIDYLVLVHMDFRRFLMGVSKYDKGHWKNIAHHYVITKTPTQVASHAQKYYLRQNLSGGKRKRSSIHDITIDNLKTSGQDKPAILFDESHMPNVQPQKGINHHNVLEPLMQNEEPLMQVFNPNYDDMFLSSSYDIYSEFQVLEDLYNCAFHHPYAQQGFTMASNDFNMDPTFGIHAP. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02306 247 Pfam Myb-like DNA-binding domain 84 120 IPR001005 -
Seca8g02306 247 PANTHER TRANSCRIPTION FACTOR KUA1 2 171 - -
Seca8g02306 247 MobiDBLite consensus disorder prediction 32 54 - -
Seca8g02306 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 125 IPR017930 -
Seca8g02306 247 NCBIfam myb-like DNA-binding domain, SHAQKYF class 83 124 IPR006447 GO:0003677
Seca8g02306 247 SUPERFAMILY Homeodomain-like 83 125 IPR009057 -
Seca8g02306 247 Gene3D - 79 126 - -
Seca8g02306 247 CDD SANT 81 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02306 Seca-Chr8 49832948 49833764 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02306 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02306 - - gmx:100783469 191.045