Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02298 ATGGAATCTGAAGATCTTTATACATTTTGTTTTGCGCCCAATTCAAATGGGTTTGTTCAAGAGACAATCACAAAATGGAGTAGAGAAATGGTAGAAGATGTGAGTAAGATAGAAGCTGCAGGAGGGGTTCCAGTTCCTGCATATCCTTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAAAAAGAGGCCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCATTGGACAAAAGAGGAGCACACACGTTTTCTGATGGGAGTTTCGAAGTATGGCAAAGGGCACGGGAGAGATATCGCTCACAATTATGTAATCACAAAGACTCCTACCCTAGTGGCAAGCCATGCTCAAAAGCACTACATAAGGCAAAACCTTTCTGGAGGGAAAAGGAAGAGATTTAGTATCCATGATATCACCATTGATAACCTTAAAACTTCAGGTCAAAACAAGCTAGCTATTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCACCACAATGTGTTAGAGCCACTCATGCAGAATGAAGAGCCAGTTTATGATGATATGTTCTTGTCTTCCTCATATGACATCTATTCCGAGTTTCAAGTTCTGGAAGATCTATACAACTGTGTTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCTAATGACTTCGACTGTGCTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAGTGGCTTCTAATGACTTCAACAACATTAGATGA 771 0.415 MESEDLYTFCFAPNSNGFVQETITKWSREMVEDVSKIEAAGGVPVPAYPFSMEMVDNLQGHDGCKKRPATAKERKKGVHWTKEEHTRFLMGVSKYGKGHGRDIAHNYVITKTPTLVASHAQKHYIRQNLSGGKRKRFSIHDITIDNLKTSGQNKLAILFNESHMPNVQPQEGINHHNVLEPLMQNEEPVYDDMFLSSSYDIYSEFQVLEDLYNCVFHQPYAQQGFTMASNDFDCAFHQPYAQQGFTVASNDFNNIR. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02298 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 128 IPR017930 -
Seca8g02298 256 NCBIfam myb-like DNA-binding domain, SHAQKYF class 75 127 IPR006447 GO:0003677
Seca8g02298 256 SUPERFAMILY Homeodomain-like 74 128 IPR009057 -
Seca8g02298 256 SMART sant 76 126 IPR001005 -
Seca8g02298 256 Gene3D - 78 129 - -
Seca8g02298 256 Pfam Myb-like DNA-binding domain 79 123 IPR001005 -
Seca8g02298 256 PANTHER TRANSCRIPTION FACTOR KUA1 20 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02298 Seca-Chr8 49774865 49775786 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02298 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02298 - - gmx:100783469 191.815