Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02271 ATGGAATTTGAAGATCTTTATGCATCTATTTTTGCGCCAAATTCAAATGGGTTTGTTCAAGAGACAATCACAGAATGGAGTAGAGAAATGGTAGAAGATGTGAGTAAGATAGAAGCTGCAGGAGGGGTTCCAGTTCCTGCATATCCTTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAACAAGAGGCCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACACGTTTTCTGATGGGAGTTTCGAAGTATGGCAAAAGGCACTGGAGAAACATCGCTCACCATTATGTAATCACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTACCTAAGGCAAAACCTTTCGGGAGGGAAGAGGAAGAGGTCTAGTATCCATGATATCACCACTGATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTATTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCACCACAATGAATTAGAGCCACTCATGCAGGTTTTCAACCCAAATTACGATGATACGTTCTTGTCTACCTCATCTGACATCTGTTCCCACTTTCAAGTTCAGGGAGATCTATACAACTGTGCTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCCAATGATAACTTCGACTGTGCTTTTGGCTTCCAATGA 723 0.4329 MEFEDLYASIFAPNSNGFVQETITEWSREMVEDVSKIEAAGGVPVPAYPFSMEMVDNLQGHDGCNKRPATAKERKKGVRWTKEEHTRFLMGVSKYGKRHWRNIAHHYVITKTPTQVASHAQKYYLRQNLSGGKRKRSSIHDITTDNLKTSGQDKPAILFNESHMPNVQPQEGINHHNELEPLMQVFNPNYDDTFLSTSSDICSHFQVQGDLYNCAFHQPYAQQGFTMASNDNFDCAFGFQ. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02271 240 ProSiteProfiles Myb-like domain profile. 72 124 IPR001005 -
Seca8g02271 240 NCBIfam myb-like DNA-binding domain, SHAQKYF class 75 127 IPR006447 GO:0003677
Seca8g02271 240 Gene3D - 78 129 - -
Seca8g02271 240 SUPERFAMILY Homeodomain-like 74 128 IPR009057 -
Seca8g02271 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 128 IPR017930 -
Seca8g02271 240 PANTHER TRANSCRIPTION FACTOR KUA1 23 174 - -
Seca8g02271 240 SMART sant 76 126 IPR001005 -
Seca8g02271 240 Pfam Myb-like DNA-binding domain 79 123 IPR001005 -
Seca8g02271 240 ProSiteProfiles SANT domain profile. 79 128 IPR017884 -
Seca8g02271 240 CDD SANT 79 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02271 Seca-Chr8 49591541 49592414 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02271 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02271 - - ccaj:109813886 206.838