Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02246 ATGGATGATCCCAGAGACCAGTTTCCTATAGGAATGCGTGTTCTTGCTATTGATGATGACCCAACATGTCTCATGGTTTTGGAGACTCTGCTAAGAAGATGTCAATACAATGACATGGATGGCTTTAAGCTGCTTGAGCTTGTGGGTCTTGAGATGGACCTACCTGTCATAAATTTAATGAATGTTGAAAAGCTCACAAGGAAAAATGTGAAATATAGACTTTATCTGAAAAGAATCAGCTGTCAAGTAAACCAACAAGCTAATATGGTGGCAGCCTTAGGTGGTGTAGATACATCCTATTTGGGAATGGGTTCTCTAAGTGGGGTTAGACATTTGCAGTCATTGAGTGGTTCTAGACAGTATCATAACAACCCTTTCAGACCCTTTGCACCTGGTGGGATGATGAGTAGATTGAACACTCCTGCTAGTCTGAATTTTCATGGGTTTTCTTCTTGTGGATCTCTTTAG 468 0.4081 MDDPRDQFPIGMRVLAIDDDPTCLMVLETLLRRCQYNDMDGFKLLELVGLEMDLPVINLMNVEKLTRKNVKYRLYLKRISCQVNQQANMVAALGGVDTSYLGMGSLSGVRHLQSLSGSRQYHNNPFRPFAPGGMMSRLNTPASLNFHGFSSCGSL. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02246 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 37 IPR045279 GO:0009736
Seca8g02246 155 SUPERFAMILY CheY-like 11 63 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02246 Seca-Chr8 49400294 49401784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02246 6 59 Response Regulator Gene Family AT4G31920 52.941 2.50e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02246 - K14491 gmx:100777171 140.969