Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02239 ATGGTAGAAGATGTGAGGGAACCTTTCAAGGTATATATGGAATTTGAAGATCTTTATGCATCTATTTTTGCGCCAAATTCAAATGGGTTTGTTCAAGAGACAATCACAGAATGGAGCAAAGAATTGGTAGAAGATGTGAGTAAGATAGAAGCTGCAGGAGGGGTTCCAGTTCCTGCATATCCTTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAACAAGAGGCCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACACGTTTTCTGATGGGAGTTTCGAAGTATGGCAAAAGGCACTGGAGAAACATCGCTCACCATTATGTAATCACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTACCTAAGGCAAAACCTTTCGGGAGGGAAGAGGAAGAGGTCTAGTATCCATGATATCACCACTGATAACCTTAAAACTTCGGGTCAAGACAAGCCAGCTATTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCACCACAATGAATTAGAGCCACTCATGCAGGTTTTCAACCCAAATTACGATGATACGTTCTTGTCTACCTCATCTGACATCTATTCCCACTTTCAAGTTCAGGGAGATCTATACAATTGTGCTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCCAATGATAACTTCGACTGTGCTTTTGGCTTCCAATGA 759 0.4295 MVEDVREPFKVYMEFEDLYASIFAPNSNGFVQETITEWSKELVEDVSKIEAAGGVPVPAYPFSMEMVDNLQGHDGCNKRPATAKERKKGVRWTKEEHTRFLMGVSKYGKRHWRNIAHHYVITKTPTQVASHAQKYYLRQNLSGGKRKRSSIHDITTDNLKTSGQDKPAILFNESHMPNVQPQEGINHHNELEPLMQVFNPNYDDTFLSTSSDIYSHFQVQGDLYNCAFHQPYAQQGFTMASNDNFDCAFGFQ. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02239 252 CDD SANT 91 135 IPR001005 -
Seca8g02239 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Seca8g02239 252 SUPERFAMILY Homeodomain-like 86 140 IPR009057 -
Seca8g02239 252 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
Seca8g02239 252 PANTHER TRANSCRIPTION FACTOR KUA1 33 186 - -
Seca8g02239 252 Pfam Myb-like DNA-binding domain 91 135 IPR001005 -
Seca8g02239 252 ProSiteProfiles SANT domain profile. 91 140 IPR017884 -
Seca8g02239 252 SMART sant 88 138 IPR001005 -
Seca8g02239 252 Gene3D - 90 141 - -
Seca8g02239 252 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02239 Seca-Chr8 49356991 49362265 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02239 Myb_DNA-binding 2.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02239 - - ccaj:109813886 206.068