Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02234 ATGGAATTTGAAGATCTTTATGCATCTATTTTTGCGCCAAATTTAAATGGGTTTGTTCAAGAGACAATCTCAGAATGGAGTAGAGAAATGGTAGAAGATGTGAGTAAGATAAAAGTTGCAGGAGGGGTTCCAGTTCCTGCATATCCTTTCTCCATGGAGATGGTTGACAACCTGCAGGGTCATGATGGATGCAACAAGAGGCCTGCAACTGCCAAAGAGAGGAAGAAAGGGGTTCGTTGGACAAAAGAGGAGCACACCCAAAAGGCCGAGAAAGGTATAGTTTTACATTCTTTTCTGGCTATTGATTATCTTGTTTTGGTTCACATGGATTTCAGACGTTTTCTGATGGGAGTTTCGAAGTACGACAAAAGGCACTGGAAAAACATCGCTCACCATTATGTAATCACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTACCTAAGGCAAAACCTTTCGGGAGGGATAAGGAAGAGGTCTAGTATCCATGATATCACCACTGATAACCTTAAAACTTCAGGTCAAGACAAGCCAGCTATTTTGTTCAATGAGTCTCACATGCCAAATGTGCAACCACAAGAAGGGATTAATCTCCACAATGAATTAGAGCCACTCATGCATAATGAAGAGCCACTCATGCAGGTTTTCAACCCAAATTACGATGATACGTTCTTGTCTACCTCATCTGACATCTATTCCCACTTTCAAGTTCAGGGAGATCTATACAACTGTGCTTTTCATCAGCCTTATGCCCAACAAGGTTTCACAATGGCTTCCAATGATAACTTCGACTGTGCTTTTGGCTTCCAATGA 822 0.4185 MEFEDLYASIFAPNLNGFVQETISEWSREMVEDVSKIKVAGGVPVPAYPFSMEMVDNLQGHDGCNKRPATAKERKKGVRWTKEEHTQKAEKGIVLHSFLAIDYLVLVHMDFRRFLMGVSKYDKRHWKNIAHHYVITKTPTQVASHAQKYYLRQNLSGGIRKRSSIHDITTDNLKTSGQDKPAILFNESHMPNVQPQEGINLHNELEPLMHNEEPLMQVFNPNYDDTFLSTSSDIYSHFQVQGDLYNCAFHQPYAQQGFTMASNDNFDCAFGFQ. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02234 273 CDD SANT 110 149 IPR001005 -
Seca8g02234 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 154 IPR017930 -
Seca8g02234 273 PANTHER TRANSCRIPTION FACTOR KUA1 23 200 - -
Seca8g02234 273 SUPERFAMILY Homeodomain-like 112 154 IPR009057 -
Seca8g02234 273 Gene3D - 108 155 - -
Seca8g02234 273 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 153 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02234 Seca-Chr8 49298649 49299643 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g02234 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02234 - - ccaj:109813886 187.578