Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02228 ATGGCTCCTCAAGCACGAATCGCTGCGTACAAAGTATGCTGGACTGACGGTTGCTTTGCCTCAAACATACTCGCCGGAATGGATCAAGCGATCCAGGACGGAGTTGACGTGCTCTCGCTCTCCCTCGACGGTTCCTCCTCCGCCCCTTACCACCGCGACACCATCGCAATCGGAGCATTCACAACGATGGAGAGGGGAATCTTCGTTTCGTGCTTGGCGGAGAATAACGGACCTCGAAGGAGAGAAAGGGTGGAGGATGGTGGAGAGTGGGTGCATCTGAGAGAGAGACAAGCTTGA 297 0.5556 MAPQARIAAYKVCWTDGCFASNILAGMDQAIQDGVDVLSLSLDGSSSAPYHRDTIAIGAFTTMERGIFVSCLAENNGPRRRERVEDGGEWVHLRERQA. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02228 98 ProSiteProfiles Serine proteases, subtilase domain profile. 1 98 - -
Seca8g02228 98 Gene3D Peptidase S8/S53 domain 1 91 IPR036852 GO:0004252|GO:0006508
Seca8g02228 98 Pfam Subtilase family 1 84 IPR000209 GO:0006508|GO:0008236
Seca8g02228 98 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 90 IPR045051 -
Seca8g02228 98 SUPERFAMILY Subtilisin-like 1 79 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02228 Seca-Chr8 49052344 49052640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02228 1 91 Subtilisin-like Serine Gene Family AT2G05920 67.033 5.27e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02228 - - gmx:100797924 123.25