Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02207 ATGATGAAATCTGCAGCATCAAGGACAGTTGGAACTTCATTTTTTAGTCCCTTATGCGTGGCTTGGTTAGCAAATTTATTTACCGATACTGAGGTTTTCCCTTGTCTCGTGCATTTCAGTATGAGGTCTTACTATCATAGTTGTTATGATAAGGCTGAGGGCAGTTTATGGATACACAAGTACAAGCCAACAAAGGCCTTTGAGGTGTGCGGTAATGATGAATCTCTAAATTTCTTGCGTGACTGGTTACACCTTTGGCATGAAAGACGTTACCAAAGCAGAAAGGATTCCTCTAACTGGGATCAAAGAGATACTCAAAACGATGATGTTTATAGCTGTTCTGATGGTGACTATTCTTCAAAAGATCTCAACAAGGAGGATTCCCTGCAGAACGTTCTTTTGATTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAGGAACAAGGGTTTGACGTTTTAGAGCTCAATGCATCAGACTGTCGAAATGGGACTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGTTGCAAAAGGTTACTGGAACACAGTGTGAGTTCACAGAAGAAAACTGTGATATTGCCCCCAGCTCCAGCTTTGCCTAATGGTAAAGCAGTTGAGGAGATGGATGATGGGGTGATTGAATTGATAACCATATCCAATGGTGGAGCTCATAGTCCTGATGGAAAATCTCAGATGTTACATGAAAAAAATAATGTATTTACATGTGATAGTGTTCAAACTTTAATTTTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATAAAACACATTGCTGAGACAGCAAAAGGGCCAATTATATTGACCAGCAACAGTAATAATGGTGGCCTTCCAGAAAATTTTGTCAGACTACATATTCCTTTCTCATTGCCATTGCGAGATGAGTTGCTTTGCCATTTGTACATGGTTTGTGACACTGAAGAAGTCAACATCAATCCACTTTTACTGGAGAAGTTTATCAAGTCTTGCGATGGAGATATTCGAAAAACCATTATGCATGTTCAGTTCTGGTTCCAGAATAAAAAATCTAGAAAAGACAGGAAAGTGCAGACAGTATATGGCTCACTTCCATTTGATCTCGAGGCTGGTCATCAGATACTACCAAAGATCATACCCTGGGATTTTCCCTCAGAGCTATCCAAACTAATTGAGAAAGAAGTTTCCAAGTCAGTAATCGTAATGGAAGAAAACTCATGTTTGCAGGGGTTAGTTGAGGAAGAGCTTCACAAAAATGAAAAGCAAAACAATTTAGATGTACAATGTAAGGGAACTGATTATTTAGAGGCCAAGGTAGAGGTGAAGAGGAATAGATCTATTACAGACTGCAGCGAGTTTGGTCAATATAGTGCTATTTCTGAGCTTGCTAATTGTTCTGGATCCCCAGTAACATCCTTTTGGCAAAAGGGCCAAAGGAAACTTATAGTGATGTCCTCTGAGTCTGTGGATAAGGATCCAAATAATGGACATTCACTAGAGGGTCATGATGAATCTTTCAAGAGACAATCCCTTGAAGGAAACAGTGTATCTTCCTGTAAGTTTCAATTGAATCATTGCTACACTAGTTCGTCATTTTGCAAGCTGGCTTGTTCTAGTTTGGAGGATTCAGAAGAACAGCGTAAATATTTAGGAACAGCTTATGATGCCTGTTTAAATGAAACATGTAAATCATCTGGTATATCCAGTTTTCCAGAATCAACAATTGTTCCAGAGATTGCAATTCAAAATAGAGTAGAGACAATGTCTGGAGCAGTGTCTTCTGGCCATCTTGCCAGTCCAGTAGAAGTTTCTCTGGATAATGAGCTGACACCATTCACTTTCAGTGTTTGTCAGCGCATAGCCAGCCTGCCACAAAATTTGGATTCTTTGGTGAATACTGAAATTCCAGAATCTTCTCCAAAAGCAGCTGTGCAAGTTTTTAGAGATGAGAACATGGAAACCACAACTGTGTATAACATGATGAATGAGTGCAGTCATGCTGATTTTAAATTGAAGTTTGTTGAGTCCAGTCCATCTATGGAGATAGATATGGTGCAAAATTTGTGGAGGAAACTTTGTGATTGTCGAACGGATTTAAGACAGCACGCCACCTCAGAACAGCTAGGTGCTATTCAAGCTGTTCAACTTGCTAGTGGGATGACCAATCTAATTTCAGAAGCTGACTTCTTGTTTCGTAATCACCAACAAAAGCAATGTGGTATTATGGAACCTCCTATTTTCCTTTCTGATGAAGCCACATTTAGTTGGTATAATGAGCAAATGATGATGTCCACTGTTGCTGTACATGGTTTTTGTTTTTATGCCAAACATATATCAGATGTGGGATCAAAGTTGGGTTGTGAGAACAGGGTAGACATAACTTCAGAGATGTTGGCTTCCACTACTAATATCATGGCACTGGGGAAGTTATCTAGACAGGACCACACAAAAAGCATGAGTAACTGTTCTGAAAAGCAGTCAGAGCTGAAAACCCCAAGAAATAATATGAAGAGGAAATACAATGAAAACCGAACATTTCTATTCAATGTGATCCAGTCCATAGTTCCTGCAAGATTATCATTGGCAATGAAAGGTGTTGCATTCAGTGAATATCTATCTTCACTACGCCAAATTTCAATTTCAGAAGGTTTCCGAATTACACATGGTGTTAAAAAGATGAGAAAAGGAAGGACGCGGGGTGCTCAACATTATTTGAGCAGAGGTTCAATGTTGTCTCCTGAAGATATATCATTGGTGTGTGAGGGTGATTTGTACAGAAAGATTTCTTCACAGTACACCTCTAACATGGAAGCAAATGTACAAGATTAA 2871 0.3964 MMKSAASRTVGTSFFSPLCVAWLANLFTDTEVFPCLVHFSMRSYYHSCYDKAEGSLWIHKYKPTKAFEVCGNDESLNFLRDWLHLWHERRYQSRKDSSNWDQRDTQNDDVYSCSDGDYSSKDLNKEDSLQNVLLITGPIGSGKSAAVYACAQEQGFDVLELNASDCRNGTAVKQYFGDALGSHGCKRLLEHSVSSQKKTVILPPAPALPNGKAVEEMDDGVIELITISNGGAHSPDGKSQMLHEKNNVFTCDSVQTLILVEDVDILFPEDRGCIAAIKHIAETAKGPIILTSNSNNGGLPENFVRLHIPFSLPLRDELLCHLYMVCDTEEVNINPLLLEKFIKSCDGDIRKTIMHVQFWFQNKKSRKDRKVQTVYGSLPFDLEAGHQILPKIIPWDFPSELSKLIEKEVSKSVIVMEENSCLQGLVEEELHKNEKQNNLDVQCKGTDYLEAKVEVKRNRSITDCSEFGQYSAISELANCSGSPVTSFWQKGQRKLIVMSSESVDKDPNNGHSLEGHDESFKRQSLEGNSVSSCKFQLNHCYTSSSFCKLACSSLEDSEEQRKYLGTAYDACLNETCKSSGISSFPESTIVPEIAIQNRVETMSGAVSSGHLASPVEVSLDNELTPFTFSVCQRIASLPQNLDSLVNTEIPESSPKAAVQVFRDENMETTTVYNMMNECSHADFKLKFVESSPSMEIDMVQNLWRKLCDCRTDLRQHATSEQLGAIQAVQLASGMTNLISEADFLFRNHQQKQCGIMEPPIFLSDEATFSWYNEQMMMSTVAVHGFCFYAKHISDVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHTKSMSNCSEKQSELKTPRNNMKRKYNENRTFLFNVIQSIVPARLSLAMKGVAFSEYLSSLRQISISEGFRITHGVKKMRKGRTRGAQHYLSRGSMLSPEDISLVCEGDLYRKISSQYTSNMEANVQD. 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02207 956 Gene3D - 54 305 IPR027417 -
Seca8g02207 956 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 41 944 IPR004582 GO:0006281
Seca8g02207 956 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 315 376 - -
Seca8g02207 956 Gene3D - 313 376 - -
Seca8g02207 956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 370 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02207 Seca-Chr8 48665975 48681272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02207 57 358 Core DNA Replication Machinery Family AT5G22010 22.222 7.16e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02207 K26118 - gmx:100815984 1209.13