Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02191 ATGCAGTATCAAGCAGATGATACCATGTTTGGTCGAATTTATAATGTAACTTCGATCAACTACTCCAATTACAGTCAGATTCAAAAGCAGCTGATGTCACTGAGAAGCTTTCCAGATGGGAAGAGGAATTGCTATACCTTGAAACCCAAACAGGGAAAGAACAATAAATATCTTATCAAGGCTTACTTCATATATGGAAACTATGACAACAAATATCAACAGCCAAGTTTTGATATATATCTTGGCGTCAATATCTTGCGGAGGGCAAAAGTCAATACGCTTGGTTCCGTTTCTCGAAGAGAGGCTATTCATTTTACCTCAACAGACACAATCGACTACTGTCTTGTAAACATTGAGCAAGGAGTACCTGTCATTTCATTATTGGAACTGTGGCCTTTGGATAGTTCTATTTATCGAACTTCGTCTAATTTATTGCCTCTGTTTCTCAACACACGAATAAACCTTGGCAGTTCCCAATTTTTTATTAGGTACCCAGATGACATATATGGAAGGTCTTGGTACATAGGAGAAGAATATTATAAGAATCCAAAGAAAACATCATCAACTATTGATTTGGATAAACTTGATGATCCTTACAAACTACCGACAGAAGTTTTGAGTACTGCAGTGGAGGCGCTGAACTTGTCCAATTCTTTGGAATTCCCTATAAAATATAACTCAAGTTCTGAGTATAATTATGTCTATCTTCATTTTTTTGACTTTGAGGATCGGGCAAATAATCAGAAAAGGATAATGAAAATTTCTATCAATGGTCATGGTGATGCAGTCACACAACTTCTCACCCTTGCATATTGGAAGCCCACGAGCATAGCGATACCTTTAAAACAAGGAATGGGCATTTCTAGTATTTTGATTGAAGCCACCTCTGATTCTGACTTACCTGCCATGCTTAATGCTTTGGAGATTTACACTGTAGTGGATCAGCCTAATTCAGCCACTACTCAACAAGACGATGTGGATGCTATCCGGAACATTAAAGATTTCTATAAGATCTCTAAAATAAGCTGGCAAGGCGACCCTTGCGGGCCAGTAGATTTTACATGGGAAGGTGTGACATGCAACGATGGACACAATCTAAGAATCATCTCATTAAACTTGAGCTCAAGCATATTGTCAGGCAAGATAGATGCTTCATTCTCCAATCTTACACACTTAGAAACTTTGGATTTGTCAAACAATGAATTGATAGGAGAGCTGCCAGAATTTTTGGCAAACCTATCAAGATTGAAGACCCTCAATTTGTCAAGGAATAATCTCACAGGTTCCATTCCCGAGTCTCTTAAGGCGAGGATGAAGTCAAATAAACCTTTGCAATTGAGTTTGGAGGAAAATATCGGCCTTTGCCAGATAGATTCGTGCGAAAGCAACAACCATAAGTCTATTGTTCCATTAGTAGCATCTATAGTAGCATCCGTTGCAGTAGTCCTCATAATCGTTGTCATTGTTATGGTGATACGGAGACTCAGAAAAAATGGAAAAGATCCAGGTTCTTCTAAGCAAGATAAGCAGCTGAAGTTGAAAAATCAAGAATTTCATTACTCAGAGGTTGTTAGTATTACTAATGATTTCAATACAATGATTGGAAAAGGTGGATTTGGTAAAGTTTACCTAGGTATTGTACAAGGTGACAAAAGAGTTGCTGTAAAGATACTTTCATTGTCATCAGTGCAAGGATACAAGGAGTTTAAGTCAGAGGCCAAATTATTGATGCTTGTTCATCATAGAAATGTGGTTTCTCTTGTGGGTTACTGTGACGAAGGTGATAATAAAGCACTTATTTATGAATTTCTCCCAGGAGGAGACCTCCAACAACATTTGTCAGATAAAAACCAAAATATTTTGGAATGGAATGAGAGACTTCAAATTGCCTTGGATGCAGCAAATGGGTTGGACTATCTGCATAATGGATGTAAGCCACCTATAATTCATAGAGACGTAAAACCTTCCAACATCTTACTCGATGAAAAAATGCGTGCTAAGATTTCAGACTTTGGATTGTCTAGAACATTTGCAAACGACATTGACACTCATGTCTCAACTAATTTCCCAGCTGGCACGCCGGGTTACGTTGATCCTGAGTAA 2103 0.3809 MQYQADDTMFGRIYNVTSINYSNYSQIQKQLMSLRSFPDGKRNCYTLKPKQGKNNKYLIKAYFIYGNYDNKYQQPSFDIYLGVNILRRAKVNTLGSVSRREAIHFTSTDTIDYCLVNIEQGVPVISLLELWPLDSSIYRTSSNLLPLFLNTRINLGSSQFFIRYPDDIYGRSWYIGEEYYKNPKKTSSTIDLDKLDDPYKLPTEVLSTAVEALNLSNSLEFPIKYNSSSEYNYVYLHFFDFEDRANNQKRIMKISINGHGDAVTQLLTLAYWKPTSIAIPLKQGMGISSILIEATSDSDLPAMLNALEIYTVVDQPNSATTQQDDVDAIRNIKDFYKISKISWQGDPCGPVDFTWEGVTCNDGHNLRIISLNLSSSILSGKIDASFSNLTHLETLDLSNNELIGELPEFLANLSRLKTLNLSRNNLTGSIPESLKARMKSNKPLQLSLEENIGLCQIDSCESNNHKSIVPLVASIVASVAVVLIIVVIVMVIRRLRKNGKDPGSSKQDKQLKLKNQEFHYSEVVSITNDFNTMIGKGGFGKVYLGIVQGDKRVAVKILSLSSVQGYKEFKSEAKLLMLVHHRNVVSLVGYCDEGDNKALIYEFLPGGDLQQHLSDKNQNILEWNERLQIALDAANGLDYLHNGCKPPIIHRDVKPSNILLDEKMRAKISDFGLSRTFANDIDTHVSTNFPAGTPGYVDPE. 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02191 700 SUPERFAMILY L domain-like 351 435 - -
Seca8g02191 700 FunFam Os07g0541700 protein 605 693 - -
Seca8g02191 700 PANTHER OS07G0107800 PROTEIN-RELATED 2 700 - -
Seca8g02191 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Seca8g02191 700 Pfam Malectin-like domain 2 312 IPR024788 -
Seca8g02191 700 PRINTS Leucine-rich repeat signature 413 426 - -
Seca8g02191 700 PRINTS Leucine-rich repeat signature 392 405 - -
Seca8g02191 700 ProSiteProfiles Leucine-rich repeat profile. 415 437 IPR001611 GO:0005515
Seca8g02191 700 Pfam Leucine rich repeat 370 426 IPR001611 GO:0005515
Seca8g02191 700 Gene3D Transferase(Phosphotransferase) domain 1 604 700 - -
Seca8g02191 700 SMART serkin_6 528 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02191 700 FunFam Leucine-rich repeat receptor-like protein kinase 505 603 - -
Seca8g02191 700 ProSiteProfiles Protein kinase domain profile. 528 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02191 700 SUPERFAMILY Protein kinase-like (PK-like) 510 700 IPR011009 -
Seca8g02191 700 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Seca8g02191 700 ProSiteProfiles Leucine-rich repeat profile. 391 414 IPR001611 GO:0005515
Seca8g02191 700 Pfam Protein tyrosine and serine/threonine kinase 530 685 IPR001245 GO:0004672|GO:0006468
Seca8g02191 700 FunFam Leucine-rich repeat receptor-like kinase 324 455 - -
Seca8g02191 700 Gene3D Phosphorylase Kinase; domain 1 510 603 - -
Seca8g02191 700 Gene3D Ribonuclease Inhibitor 328 447 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02191 Seca-Chr8 47945705 47963379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02191 29 700 Receptor kinase-like Gene Family AT1G51850 42.270 6.03e-176 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca8g02191 Malectin_like 7.2e-69 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02191 - - mtr:11437028 810.061