Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02185 ATGGGTGTGGCAACATGTTGTGAGAAGGTACATTCATGGCTCCGCGAATCAAAGGCTTTACTGCTAATTCTAAGCTTGCAATTTGGCTCTGCTGGGATGTATGTTATCACCATGGATGCTCTCAATAAGGGCATGAGTCATTATGTATTCGTCGTTTACCGTAATATCATCGCCACCGTAGCTCTTGGCCCCTTCGCATTTTTTATTGAAAGGAAAATTAGGCCCAAGATGACAACTCGGATATTTTCAGAGATTATGGCACTGGCTTTTGTCGAGATAATACTTGATCAATGTTTCACCTTCTTAGGGATGAAGCTAACATCAGCATCTTTTGCATCTGCCGTGATGAATTCCGTACCATCCATTACTTTTGTACTGGCAATCATTTTTCGATTGGAGCGCATGAGAATTAAGGAGCTAGGATGTCAAGCGAAAGTGATTGGCACCGTAGTAACTCTTGGAGGCGCTTTTCTAATGGCACTGTACAAAGGTCCTGTTGTTGGCTCATCTGCAAGCCATGTTGGTCAGCCTGAGAATGTCAATGACCCCACTGGCTCCCATTGGCTCTTTGGTGCATGTTTCCTCCTCATTGGTTGTGCTGGCTTCTCTGCTTTCTACATTTTGCAAGCCATAACATTAAAAAAGTACCCAGCTGAGATGTCTCTAGCCACGTGGATATGTTTTATTGGTGCACTTCAAAGCAGTGCAGTAACTATTTTCATGGAGCGCCATAACCCTCATGCCTGGTCTGTACGCTTGGATTCTAGCCTTTTTGCTTCTGCATATTCGGGAATAGTAACTTCAGCAATCCAATTTTATGTGCAAGGCATGGTTATTAAAACTAAGGGCCCAGTGTTTGTGACTGCTTTTAATCCCCTGCGTATGATCATAGTAACCGCCTTGGCCTGCATCGTTCTCTCAGAGAAACTTCACCTTGGAAGGTACTATAGCAAATGA 957 0.4378 MGVATCCEKVHSWLRESKALLLILSLQFGSAGMYVITMDALNKGMSHYVFVVYRNIIATVALGPFAFFIERKIRPKMTTRIFSEIMALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMRIKELGCQAKVIGTVVTLGGAFLMALYKGPVVGSSASHVGQPENVNDPTGSHWLFGACFLLIGCAGFSAFYILQAITLKKYPAEMSLATWICFIGALQSSAVTIFMERHNPHAWSVRLDSSLFASAYSGIVTSAIQFYVQGMVIKTKGPVFVTAFNPLRMIIVTALACIVLSEKLHLGRYYSK. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02185 318 Pfam EamA-like transporter family 20 159 IPR000620 GO:0016020
Seca8g02185 318 Pfam EamA-like transporter family 190 312 IPR000620 GO:0016020
Seca8g02185 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Seca8g02185 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 314 - -
Seca8g02185 318 PANTHER WAT1-RELATED PROTEIN 20 312 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02185 Seca-Chr8 47645939 47649954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02185 18 315 Nodulin-like Gene Family AT1G21890 50.162 4.31e-101 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02185 - - gmx:100813852 535.798