Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02151 ATGGACACGCTCATGGATGATGTCCCTGATCTCGATTTCTCCAGCTATAGCACCACCACCCCTACTTCCGACGACGACGCCGGCTGTAACTGGACACCCTGGTCCCCACTCGTCGACTGGGACTCCTTCACCGCCGGCCAAGACAACTTCCACGACCTCATCGAATCCTTCATGGAAGACAACCTCGCCGCCGGCGTCCTTACTCCCGAACACGCCGCCGCAGAAGAGGAATCAACCGGAGATGGGTGTAACTCTGCTTCCACGACGGCTACCGATGACGGCGACAACCAGAAGGGCCTCCGCCTGGTGCACCTCCTGATGGCGGCGGCGGAGGCCCTTACCGGCACCAACAAGAGCCATGACTTGGCTCGAGCGATATTGGTTCGGCTCAAGGAATTGGTGTCCCCAACCCACGGCACCAATATGGAGAGGCTCGCGGCGTATTTTACCGAAGCCCTCCAGAGTCTGCTAGATGGCGCGGTGGGTGCGCACACCACCACCCTTAAGCATTACATCATCGGTGGTCCCAATCATGAGGACCAACTAACGGACATGCTAGCAGCCTATCAGCTTCTTCAGGACATGTCACCTTATGTTAAGTTCGGCCATTTCACTGCCAATCAGGCCATCCTTGAGGCCGTGGCCCACGAGCGAAGGGTCCACATCGTTGATTATGACGTCATGGAAGGGGCCCAATGGGCTTCGCTCATGCAGGCCTTCGCTTCCAAGAAGGACGGCCCGCCGGGCCCGCACCTCCGCATCACTGCATTGTCCAGAAGCTGCGGCCGAGGCAATGGACGGAGATCCATCGCTACGGTACAAGAAACTGGACGAAGATTAACGGCGTTTGCAGCTTCCCTCGGACAGCCGTTTACATTTCATCAGTGCAGGTTGGACCCCGACGAAACGTTTCGTCCGTCTTCTCTGAAGCTGGTTCGCGGTGAAGCTTTGGTGTTCAACTGTATGCTGCACTTGCCTCACCTCAGCTACCGGGCCCCCGATTCGGTTGCTTCGTTCTTGAACGGTGCGAAGGAGTTAAACCCTAGGCTTGTGACTTTGGTGGAGGAGGAAGTGGGGCCTGTTGGAGACGAGGGCTTTGTTGGCTTGTTCATGGATTCGCTGCACCGTTACTCGGCTGTGTATGATTCGCTTGAAGCTGGGTTTCCCATGCAGAGATGGGCCCGGGGTTTGGTGGAGCGAGTGTTCTTGGGCCCACGAATAACAGGCTCTGTGGCCCGGTTATACCGGACGGGAGAGGAGGAAGAAAGAGGGTCGTGGGGGGAGTTATTGGGTGCGTGCGGGTTTAGTGGAGTTCCCATAAGCTTCGCTAACCATTGCCAAGCTAAGTTGTTGCTGGGTTTGTTTAACGATGGGTATAGGGTGGAGGAGGTGGGTAACAATAAGTTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCGGCATCTGTTTGGACTTTTGTTTCAGAAAGTGATTAA 1476 0.5603 MDTLMDDVPDLDFSSYSTTTPTSDDDAGCNWTPWSPLVDWDSFTAGQDNFHDLIESFMEDNLAAGVLTPEHAAAEEESTGDGCNSASTTATDDGDNQKGLRLVHLLMAAAEALTGTNKSHDLARAILVRLKELVSPTHGTNMERLAAYFTEALQSLLDGAVGAHTTTLKHYIIGGPNHEDQLTDMLAAYQLLQDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDVMEGAQWASLMQAFASKKDGPPGPHLRITALSRSCGRGNGRRSIATVQETGRRLTAFAASLGQPFTFHQCRLDPDETFRPSSLKLVRGEALVFNCMLHLPHLSYRAPDSVASFLNGAKELNPRLVTLVEEEVGPVGDEGFVGLFMDSLHRYSAVYDSLEAGFPMQRWARGLVERVFLGPRITGSVARLYRTGEEEERGSWGELLGACGFSGVPISFANHCQAKLLLGLFNDGYRVEEVGNNKLVLGWKSRRLLSASVWTFVSESD. 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02151 491 MobiDBLite consensus disorder prediction 1 27 - -
Seca8g02151 491 ProSiteProfiles GRAS family profile. 93 485 IPR005202 -
Seca8g02151 491 MobiDBLite consensus disorder prediction 80 95 - -
Seca8g02151 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 84 481 IPR005202 -
Seca8g02151 491 MobiDBLite consensus disorder prediction 12 27 - -
Seca8g02151 491 MobiDBLite consensus disorder prediction 73 95 - -
Seca8g02151 491 Pfam GRAS domain family 102 485 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02151 Seca-Chr8 47058467 47059942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02151 110 485 GRAS Transcription Factor Family AT3G54220 36.220 2.70e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca8g02151 GRAS 1e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02151 - - egr:104431927 674.855