LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g02136	ATGACCTCCCTCACCAACAATAATTACGGGTTCCTTCCCTATGAAACCAAGAAGAAGAAGGATGCAACCACATCGTTTAACTCTAAGGAACCAAAGGAAAGGCCATTTGGCTCTAAGAACAAGCCTAAGCCACCCATCTTAATTAAAGAAGATAGCAATCAATATCTCAGACTAATCATTATTGAAATCCTTGCTGGAAATGAAATTGTTAAGGCCATAATTGAGTCCACTTGTCATCGTCATGATGACATTATAGTGCAAAGTGGTTCGAATTATGTCTCCAATGTTACCATTCTCCACCCTTTGTCCCATACTGCTCATACTTTCTCTATCATCTAA	339	0.3894	MTSLTNNNYGFLPYETKKKKDATTSFNSKEPKERPFGSKNKPKPPILIKEDSNQYLRLIIIEILAGNEIVKAIIESTCHRHDDIIVQSGSNYVSNVTILHPLSHTAHTFSII.	113

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g02136	112	MobiDBLite	consensus disorder prediction	1	45	-	-
	Seca8g02136	112	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	21	104	IPR014476	GO:0003680
	Seca8g02136	112	MobiDBLite	consensus disorder prediction	14	39	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g02136	Seca-Chr8	46771078	46771416	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca8g02136	28	104	AT-hook Motif Nuclear Localized (AHL) Family	AT4G22810	44.156	4.18e-16	70.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g02136	-		-	cave:132164508	90.5077

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