Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02136 ATGACCTCCCTCACCAACAATAATTACGGGTTCCTTCCCTATGAAACCAAGAAGAAGAAGGATGCAACCACATCGTTTAACTCTAAGGAACCAAAGGAAAGGCCATTTGGCTCTAAGAACAAGCCTAAGCCACCCATCTTAATTAAAGAAGATAGCAATCAATATCTCAGACTAATCATTATTGAAATCCTTGCTGGAAATGAAATTGTTAAGGCCATAATTGAGTCCACTTGTCATCGTCATGATGACATTATAGTGCAAAGTGGTTCGAATTATGTCTCCAATGTTACCATTCTCCACCCTTTGTCCCATACTGCTCATACTTTCTCTATCATCTAA 339 0.3894 MTSLTNNNYGFLPYETKKKKDATTSFNSKEPKERPFGSKNKPKPPILIKEDSNQYLRLIIIEILAGNEIVKAIIESTCHRHDDIIVQSGSNYVSNVTILHPLSHTAHTFSII. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02136 112 MobiDBLite consensus disorder prediction 1 45 - -
Seca8g02136 112 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 104 IPR014476 GO:0003680
Seca8g02136 112 MobiDBLite consensus disorder prediction 14 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02136 Seca-Chr8 46771078 46771416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02136 28 104 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 44.156 4.18e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02136 - - cave:132164508 90.5077