Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02118 ATGGCTAGGAAAGGTGAGGGTTCAACAATCAGAATCGTTTTGAGAACGACTTACTCTTGCTTTGGTGTTTGGCAGCACGATCATGTTCAAATTATCGTCAACGATCAGGATAACAGAACCACTCCATCCTATGTGGCTTTCACTGACACAGAGCGCTTGATCGGTGATGCAACCAAGAACCAAGTCATTATGTACCCAACCAACACTGTTTTTGATGCTAAGCATTTGATCGGAAGGCGTTTTAGCGATTCTTCGGTATAA 261 0.433 MARKGEGSTIRIVLRTTYSCFGVWQHDHVQIIVNDQDNRTTPSYVAFTDTERLIGDATKNQVIMYPTNTVFDAKHLIGRRFSDSSV. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02118 86 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca8g02118 86 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca8g02118 86 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca8g02118 86 PANTHER HEAT SHOCK PROTEIN 70KDA 10 86 IPR013126 GO:0005524|GO:0140662
Seca8g02118 86 FunFam heat shock 70 kDa protein-like 3 80 - -
Seca8g02118 86 Pfam Hsp70 protein 12 86 IPR013126 GO:0005524|GO:0140662
Seca8g02118 86 Gene3D - 4 86 - -
Seca8g02118 86 SUPERFAMILY Actin-like ATPase domain 16 84 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02118 Seca-Chr8 46116880 46117140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02118 1 86 Calmodulin-binding Proteins AT5G02500 79.070 1.35e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02118 K03283 - aew:130770805 142.895