Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02098 ATGGCGGCTTCGGTTGACATTAATCTTCAATACGGTGGCCTAAGCGGCGTCGTTCGCACGTTCAACCCCAGCGGCAATTACATCCACGACCTGAAACCGGGTTTCCCGGTGGATTTAGATGCCTCCAGTAGCGACGACGAGGAAAACGATGACGCTTTGAACCTGAAAGAGCTCATACAAAAGGGAAACGCGGAGTTAGAACCTTCCGTTTTCGATCCACGCGATGAGGGAACCGCGGACAACTGGGTCCAACGCAACGGTTCCATGGTCCGTCTCACAGGGAAGCACCCTTTCAATTCCGAACCACCACTCCCACGCCTCATGCACCATGGTTTCATCACTCCGGTTCCACTCCACTACGTCCGAAACCACGGTTCGGTCCCCAAAGCACGTTGGGAGGACTGGACCGTCGAAGTCACCGGTCTAGTCAAACAACCAACCCGGTTCACCATGGACCGGCTGGTCCGCGAGTTTCCGAGCCGCGAGTTTCCCGTTACGTTAGTCTGCGCAGGTAACCGTCGCAAGGAACAGAATATGGTGAAACAAAGCGTGGGCTTCAACTGGGGCGCTGCAGCTGTTTCAACTTCCGTGTGGCGCGGAGTGCCGTTAAGCCACGTGCTGAAGCGGTGTGGGATCCACGCGCGATCGAAGGGTGCGTTACACGTGTGCTTCGAGGGTGCTGAGGATTTACCCGGTGGTGGTGGGTCTAAGTATGGAACAAGCATCAAGAGGGAGATGGCGATGGACCCTGCGCGTGATGTTATCCTCGCTTACATGCAAAACGGGGAGCCTCTGTCACCGGATCACGGGTTCCCGGTTCGGGTTATCATTCCCGGGTTCATAGGTGGACGCATGGTGAAATGGCTCAAGCGTATTGTGGTCACTGCAGAAGAATGTGACGGCCATTATCATTACAAGGACAATAGAGTACTTCCCTCCCATGTTGATGCAGAACTTGCCAATGAAGAAGGTTGGTGGTATAAGCCAGAGTACATTATCAACGAGCTAAACATAAACTCGGTGATTACGACGCCGTGTCACGATGAGATCTTGCCCATAAACTCATGGACTACCCAGAGGCCTTATGTGGTGAGAGGCTACGCATATTCCGGGGGTGGAAGGAAAGTGACACGAGTTGAGGTAACACTGGACGGTGGAGAGACGTGGCACGTGTGCAATCTGGACCACCCAGAGAAACCCAACAAATACGGGAAGTACTGGTGCTGGTGTTTTTGGTCTTTGGAGGTAGAGGTGCTGGACCTGCTTGGGGCCAAGGAGATTGCTGTTCGCGCGTGGGATGAGGCCCTCAATACCCAGCCTGAAAACCTCATTTGGAATGTTATGGGCATGATGAACAATTGCTGGTTCAGGGTGAAAACAAACGTGTGCAAGCCACACAAGGGTGAAATTGGAATAGTATTTGAACACCCAACTCAACCAGGAAACCAATCAGGAGGATGGATGGCAAAGGAAAGACACTTAGAAAGATCACAAGAATCCAACCAAACTCTCAAGAAGAGTGTCTCCACACCATTCATGAACACTTCTTCAAAAATGTTCTCCCTCTCCGAAGTGAAAAAACACAGCAACCCCGACTCCGCTTGGATCATCGTCCACGGCCACGTCTACGACTGCACCCGCTTCCTCAAAGACCATCCCGGCGGCGCCGACAGCATCCTCATCAACGCCGGCACCGACTGCACGGAGGAGTTCGAGGCAATCCATTCCGATAAAGCAAAGAAAATGCTCGAAGATTATAGAATCGGTGAACTCATAACCACAGGCTACAACTCAGACTCATCTCCCAATAACTCCCTCCATGGAAATTCCGAAATTACCCCTCACTTAGCCCCTATCAAAGAAATCATCACAATACCCACACGCAGCGTGGCTCTTAACCCACGCGAGAAAATCCCATGCAAGCTTGTCTCCAAAATCTCCATCTCTCACGACGTTAGGATCTTCCGTTTTGCATTGCCTTCGGAGGATCAACTCTTGGGGTTACCCGTAGGGAAGCACATTTTCCTATGTGCCGCAATTGACGGGAAGTTATGCATGCGAGCTTACACGCCAACAAGCGGCGTTGATGAGATTGGATTTTTTGAGTTAGTTGTGAAGGTTTATTTCAAAGGCGTGCACCCCAAGTTTCCCAACGGTGGACTCATGTCACAGCATTTGGACTCGTTGCCTATTGGGTCAGTATTGGACGTGAAAGGCCCATTGGGCCATATAGAGTACAATGGGAGAGGGAACTTTTTGGTTCACGGGAAGCAAAGATTTGCGAAGAGGCTTGCCATGTTGGCTGGTGGGACCGGGATCACACCGATTTACCAGGTGGCACAAGCGATTCTGAAGGACCCAGAGGATCGCACTGAAATGCATGTAGTGTATGCGAACCGGACGGAGGAGGATATATTGTTGAGGGAAGAGCTTGATGAGTGGGCGAAGAAGTATGGTGATAGGTTCAAGGTGTGGTATGTGGTGGAGAGTGCGAAGGATGGGTGGGAATACAGTGTGGGGTTCATCACGGAGAGTATCATGAGGGCGCATGTTCCTGAGGCTGGAGAGGATACGTTGGCTTTGACTTGTGGCCCACCACCTATGATTCAGTTTGCGGTTCAGCCTAATTTGGAGAAGATGGGGTATGACGTCAAGAATGATTTGCTAGTGTTTTAG 2676 0.5142 MAASVDINLQYGGLSGVVRTFNPSGNYIHDLKPGFPVDLDASSSDDEENDDALNLKELIQKGNAELEPSVFDPRDEGTADNWVQRNGSMVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGSVPKARWEDWTVEVTGLVKQPTRFTMDRLVREFPSREFPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSTSVWRGVPLSHVLKRCGIHARSKGALHVCFEGAEDLPGGGGSKYGTSIKREMAMDPARDVILAYMQNGEPLSPDHGFPVRVIIPGFIGGRMVKWLKRIVVTAEECDGHYHYKDNRVLPSHVDAELANEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYVVRGYAYSGGGRKVTRVEVTLDGGETWHVCNLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLERSQESNQTLKKSVSTPFMNTSSKMFSLSEVKKHSNPDSAWIIVHGHVYDCTRFLKDHPGGADSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELITTGYNSDSSPNNSLHGNSEITPHLAPIKEIITIPTRSVALNPREKIPCKLVSKISISHDVRIFRFALPSEDQLLGLPVGKHIFLCAAIDGKLCMRAYTPTSGVDEIGFFELVVKVYFKGVHPKFPNGGLMSQHLDSLPIGSVLDVKGPLGHIEYNGRGNFLVHGKQRFAKRLAMLAGGTGITPIYQVAQAILKDPEDRTEMHVVYANRTEEDILLREELDEWAKKYGDRFKVWYVVESAKDGWEYSVGFITESIMRAHVPEAGEDTLALTCGPPPMIQFAVQPNLEKMGYDVKNDLLVF. 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02098 891 PANTHER SULFITE REDUCTASE 73 465 - -
Seca8g02098 891 Gene3D - 513 594 IPR036400 -
Seca8g02098 891 FunFam NADH-cytochrome b5 reductase 626 741 - -
Seca8g02098 891 PIRSF Nitr_rd_NADH 22 890 IPR012137 GO:0006809|GO:0042128|GO:0050464
Seca8g02098 891 SUPERFAMILY E set domains 335 462 IPR014756 -
Seca8g02098 891 Gene3D - 742 891 IPR039261 -
Seca8g02098 891 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 548 555 IPR018506 GO:0020037
Seca8g02098 891 PRINTS Cytochrome B5 signature 579 591 IPR001199 -
Seca8g02098 891 PRINTS Cytochrome B5 signature 542 552 IPR001199 -
Seca8g02098 891 PRINTS Cytochrome B5 signature 567 574 IPR001199 -
Seca8g02098 891 PRINTS Cytochrome B5 signature 552 566 IPR001199 -
Seca8g02098 891 SMART Cyt_b5_2 520 592 IPR001199 -
Seca8g02098 891 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 141 176 IPR022407 GO:0043546
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 765 784 IPR001709 GO:0016491
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 687 694 IPR001709 GO:0016491
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 791 800 IPR001709 GO:0016491
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 859 867 IPR001709 GO:0016491
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 835 851 IPR001709 GO:0016491
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 551 561 IPR001709 GO:0016491
Seca8g02098 891 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 803 814 IPR001709 GO:0016491
Seca8g02098 891 Pfam Oxidoreductase NAD-binding domain 766 873 IPR001433 GO:0016491
Seca8g02098 891 CDD eukary_NR_Moco 75 460 - -
Seca8g02098 891 PRINTS Cytochrome B5 reductase signature 765 784 - -
Seca8g02098 891 PRINTS Cytochrome B5 reductase signature 803 814 - -
Seca8g02098 891 PRINTS Cytochrome B5 reductase signature 687 694 - -
Seca8g02098 891 PRINTS Cytochrome B5 reductase signature 732 746 - -
Seca8g02098 891 PRINTS Cytochrome B5 reductase signature 859 867 - -
Seca8g02098 891 PRINTS Cytochrome B5 reductase signature 666 677 - -
Seca8g02098 891 Gene3D - 74 324 IPR036374 -
Seca8g02098 891 Pfam Cytochrome b5-like Heme/Steroid binding domain 521 591 IPR001199 -
Seca8g02098 891 FunFam Nitrate reductase 76 325 - -
Seca8g02098 891 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 734 885 IPR039261 -
Seca8g02098 891 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 517 592 IPR001199 -
Seca8g02098 891 Pfam Oxidoreductase molybdopterin binding domain 124 303 IPR000572 -
Seca8g02098 891 CDD cyt_b5_reduct_like 640 886 - -
Seca8g02098 891 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 72 333 IPR036374 -
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 249 265 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 333 345 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 112 128 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 165 176 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 443 456 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 176 188 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 266 279 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 364 378 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 191 206 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 405 415 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 430 442 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 90 104 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 282 295 IPR008335 GO:0016491
Seca8g02098 891 PRINTS Eukaryotic molybdopterin domain signature 378 390 IPR008335 GO:0016491
Seca8g02098 891 FunFam Nitrate reductase [NADH] 742 891 - -
Seca8g02098 891 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 515 599 IPR036400 -
Seca8g02098 891 Gene3D Translation factors 627 741 - -
Seca8g02098 891 Pfam Mo-co oxidoreductase dimerisation domain 331 462 IPR005066 GO:0016491|GO:0030151
Seca8g02098 891 Pfam Oxidoreductase FAD-binding domain 640 746 IPR008333 -
Seca8g02098 891 SUPERFAMILY Riboflavin synthase domain-like 628 747 IPR017938 -
Seca8g02098 891 FunFam Nitrate reductase 513 594 - -
Seca8g02098 891 Gene3D - 335 511 - -
Seca8g02098 891 FunFam Nitrate reductase 335 511 - -
Seca8g02098 891 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 635 747 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02098 Seca-Chr8 45614338 45620114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02098 628 882 NADPH P450 reductases AT5G17770 41.245 5.11e-55 190