Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02095 ATGTATGCTACCTATATTGGTTTTAGCACTAGAAAAGATTGGAGAAATAAAAGCAAATTAGATGAGGAGATTGTGATATCTCAAAAATTTGTTTGTTTTAAAGAAGGCTTCAAAAGGGTTAAAGCTCATGAAAGAAAAATGACCCGTAAAGATATTAGAACGGGATGTTTACCACACATGGTCATTGGTCGACAATTAAGTGGAAAATATGTTGTTACATCTTTTTCTAAAGACCATAATCATGAGCTTGCAACCCCCAAGAGTAGGCACGAATTGTCATTGCAAAGAAGGGTTTCTATCGCTCAAGCTGTTGAAGTTGAAATGGCAAATCGTTTTGTCTCAAATCACATTAAGGATTTGTGTCATACTGCAGTAGAAATATCAAGTAAAGCCGCTGAATGTGAAGATGCTTCGACATTTTTTGCAAGAAAATTGGTGGGAATTGGCATTCAAGTTGATAACATCTTAATTAAAAGCTCTTGCACAAAAAATACATATCTTGATGATGCAAATTTCCAGACTAATGCAATACAACAAATAACACAACCATCATTTCAAATGAAAAAAAAATAA 573 0.3351 MYATYIGFSTRKDWRNKSKLDEEIVISQKFVCFKEGFKRVKAHERKMTRKDIRTGCLPHMVIGRQLSGKYVVTSFSKDHNHELATPKSRHELSLQRRVSIAQAVEVEMANRFVSNHIKDLCHTAVEISSKAAECEDASTFFARKLVGIGIQVDNILIKSSCTKNTYLDDANFQTNAIQQITQPSFQMKKK. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02095 190 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 114 - -
Seca8g02095 190 Pfam FAR1 DNA-binding domain 2 84 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02095 Seca-Chr8 45488593 45495876 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g02095 FAR1 2.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02095 - K17604 tpra:123914859 171.014