Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02090 ATGTATCGGAGGGGGAAATCCTTTCTGTTATGCTTCCTCCATATAACAGTTGTACTACTGGAACAAACTTGTGCCGTAATAAATAATCCGCGACTATGTTCCGCTTCTTCGTGCGGCAAAATCACCAACATAAGCTATCCATTTCGACTGAAGGATGATCCAGAAACCTGTGGGGATAAGAGGTATGAGTTAGTTTGCGAAAAGAACCGCACAGTGCTATATCTGTTTTGGGGTAAATACTATGTGCAAGCAATCAACTACAAAAACTACACTATCCGCCTGGTTGATCCTGCGATTCAAGAGGCTGATTTCTTGTCCACTCCTCGCTATTCCTTATCAGCATCCAATTTCACCGGTTCTTACGTTTATAGCTACAATGAGGATCCATATCAAGTCCCTGATCCGTTCTGGTATGTGTACGTAATGTACTTAAACTGTAGCAATCCAGTGAAGGATGATCCTCGGTATGTGGATACAGCTCCCTACCTCAAGTGGAATTCCAAAGGCCACATTTATGCTTTCGCTGGGAACCTGCGGCCTCGGGACTTAAAAGTTGATTGCAGCGCGAAGATGGTTGCTCCGACATCACTTTTCAATTACACTAGTTACTGGGCATGGCGGAGACAGAAGAAAACCTTTTCCTACGCGGAAATTTATAGGATGCTAGTCTATGGATTTGATGTTTCGTGGATTACAATTGCTTGTGAAGATTTATCATGTGACTACCGATATTGCCGTTTTAGTCAAACCACTGAGAATCTTGAATGCACTGATGATGTCTGTCATACTCCGTTCGGATTTCACGTCAAATGTGGTAAGAAAGAAGCACATGATCTTTTACTTTTGAAAAATGTTATTCATATTAAGTTATTAACTTCTCCTTCCCAATCTCACCTCACTGAAAAAATTGGATAG 915 0.4164 MYRRGKSFLLCFLHITVVLLEQTCAVINNPRLCSASSCGKITNISYPFRLKDDPETCGDKRYELVCEKNRTVLYLFWGKYYVQAINYKNYTIRLVDPAIQEADFLSTPRYSLSASNFTGSYVYSYNEDPYQVPDPFWYVYVMYLNCSNPVKDDPRYVDTAPYLKWNSKGHIYAFAGNLRPRDLKVDCSAKMVAPTSLFNYTSYWAWRRQKKTFSYAEIYRMLVYGFDVSWITIACEDLSCDYRYCRFSQTTENLECTDDVCHTPFGFHVKCGKKEAHDLLLLKNVIHIKLLTSPSQSHLTEKIG. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02090 304 PANTHER OS01G0690200 PROTEIN 9 262 - -
Seca8g02090 304 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02090 Seca-Chr8 45315415 45316329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02090 28 285 C3H Transcription Factor Family AT2G46495 26.415 1.31e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02090 - - tpra:123893228 283.108