Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02089 ATGATTTGCTATGGCAGTTCTCAGTTGAGGATGACAATACTATCATTGCTAATGGTGCTGCTTATGAAGCTTGGGAGTGCTGAGAATGGCCCATCCAATCGATGTCCCTTCCACCTATCTTGTACACAGAACAAGCTGATGCTTGAGCTGCCTGCAGTTCCCGTGCCTGTAAAACTCCTCGTCAGCGTCATTTACGACGAAACGCAGACAATAGTAGCACATGACCCCGAAAACTGTCTTCCGCGACTCATACTAAAGCTCAACTATTCATCATTTCTTCCTTTCTCGGGGGCTGATTCCGGTTATGGGGCCCGGAACAAAATTAGTTTCTTTGATTGTTCTTCAGCTGGGAAACGACATCTGAGAAACTACTATCAAACACAAGACGATGCGCAAGATATGTTATCTTGTCCAATTTATGCTGCAGATTATTATGAAAATAGTATCGTTGATTTGGACCTAGTATCATGCACCAAACTGTTTGACCGCGTTTTGCCCATACCAGCATATGACATACAGAGTAACTCACTCGTGCTGGGGTGGTCGGATACAAATATCGATAGAGGATGCTTTGACTGTAAGCACAAATCAAAGAAGAAGACTACAACCATTATTTTATCCACTGCAGGTGTAATCCTTGGTTCAACAGTGCTGGCACTTTTGCTCGCTGCGATCTTTCGAGTGTATCACTTTTTACGGATGAGAGGCGAGGATCAGACAAGAGTCGAAAAGTTTTTGAAGGACTACAGAGCTTTAAAGCCAACCAGATTCTATTATGCTGATATCAAGAGAATTACACATCAATTCAAGGAAAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCCACTGAAATTCTGGTTGCTGTAAAGGTCCTCAACAACACAGAGTCAGATGGAACAGAGTTCATAAATGAAGTGGGAACCATGGGCAAAATCCACCATGTCAATGTCGTTCGCTTGCTTGGCTATTGCGCTGATGGATTTCATCGTGCTTTAGTTTATGACTTTTTCCAAAATGGTTCGCTGCAGAAATTCATTTCTCCATCCAACAACAAAGATACCTTTCTTGGATGGGAAAAGTTGCAACAAATTGCTCTGGGCATAGCCAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAACGTCTTGCTAGATGACACTTTCACACCCAAAATTTCAGACTTCGGATTGGCTAAGCTCTGCTCCAAAAATCGAAGCACTGTATCCATGACTGCAGCCAGAGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAACTTTGGCAATGTGTCTTATAAGTCTGATATCTACAGTTATGGTATGTTGTTGCTAGAGATGGTTGGAGGAAAAAAGAATGTTGAGACAAGTAAAGACAATTTCCAAGTTCTATATCCAGATTGGATACACAGTTTGCTTGAAGAAGGAGACATCCAAATCCCTATTGATGAAGAGGGAGATTTCAGAATTACAAAGAAACTGGCTATTGTGGGACTTTGGTGTATCCAGTGGCACCCAGTGAATCGCCCTTCCATGAAAACTGTGGTACAGATGCTTCAAGGAGAGGGAGAGAATTTGAAAGTTCCCCGAAACCCCTTCGAGCCTACAGCTTCAACAAGTACCAGCGCTAATACTGCTGCAGGACGTCTCAATTTGGAGCTGGAAGTGATTCAAGAATTAGATTAG 1737 0.4226 MICYGSSQLRMTILSLLMVLLMKLGSAENGPSNRCPFHLSCTQNKLMLELPAVPVPVKLLVSVIYDETQTIVAHDPENCLPRLILKLNYSSFLPFSGADSGYGARNKISFFDCSSAGKRHLRNYYQTQDDAQDMLSCPIYAADYYENSIVDLDLVSCTKLFDRVLPIPAYDIQSNSLVLGWSDTNIDRGCFDCKHKSKKKTTTIILSTAGVILGSTVLALLLAAIFRVYHFLRMRGEDQTRVEKFLKDYRALKPTRFYYADIKRITHQFKEKLGEGAHGAVYKGKLSTEILVAVKVLNNTESDGTEFINEVGTMGKIHHVNVVRLLGYCADGFHRALVYDFFQNGSLQKFISPSNNKDTFLGWEKLQQIALGIAKGIEYLHQGCDQRILHFDINPHNVLLDDTFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGKKNVETSKDNFQVLYPDWIHSLLEEGDIQIPIDEEGDFRITKKLAIVGLWCIQWHPVNRPSMKTVVQMLQGEGENLKVPRNPFEPTASTSTSANTAAGRLNLELEVIQELD. 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02089 578 PANTHER RUST RESISTANCE KINASE LR10-RELATED 239 555 IPR045874 GO:0004672
Seca8g02089 578 ProSiteProfiles Protein kinase domain profile. 267 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02089 578 FunFam serine/threonine-protein kinase PBS1-like 235 341 - -
Seca8g02089 578 Gene3D Phosphorylase Kinase; domain 1 241 341 - -
Seca8g02089 578 SUPERFAMILY Protein kinase-like (PK-like) 249 536 IPR011009 -
Seca8g02089 578 Gene3D Transferase(Phosphotransferase) domain 1 342 548 - -
Seca8g02089 578 Pfam Protein kinase domain 269 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02089 578 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Seca8g02089 578 FunFam PR5-like receptor kinase 342 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02089 Seca-Chr8 45313194 45315051 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02089 210 560 Receptor kinase-like Gene Family AT1G66910 45.856 1.95e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Seca8g02089 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02089 - - tpra:123893290 764.992