Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02075 ATGGTTTCTCCTAATAGATCTCAAGAACCAGAGTGTCCACCTATGGTTAGACAAGGTTCTCTGTATAACCTCTCCTTTGATGAGGCTCAGAGCCAGTTGGGAAACACAGGGAAGCCTCTCCATACTATGAATTTGGATGAGCTTCTGAAAAGTGTGCTCTCAGCTGAAAGTGGACAACTTGTGCAAAACCCTTCATCTGATTCATTTCTTATAGGGAACACTGATCTGAATGGAACATTGAACAATAAAACCCTTAATGAGGTTTGGAGGGAAATTGTTCCCCAAGGAAGAGTCAACAGATCAAGGGAGAACAACTTGCAACAATCAATCTTAGGGGAAACAACCTTACAAGATTTTCTAGCACGTGCTGGGGTGATTAACATGGGAAATGGACAGGAAAATGATGATAAGGGTGATGCTCAATCCCTTATGGCAATGGACCCAATTGTGATGGCTTCACAGCATGAAGATTGGTTACCATTGCAAATGCAAATGCCATCTATCCATATCCACCAACAGCAATATCAGGAGCAGCAGATAATAGGACTCTGTCCAGATTTCAGTGTTTCTAAATCAGTTTATGAGAGTCCAGTTATGGAAATTGGTTACTCAGAGAATTCAATGGCCATTTCAATGCCAATGGTTTCACCAACATGTTCAGATTCCAATGGAGCTTCTGTTGTTGGAAGGAAACACAGGTACTCAGATGAGATGCTGGAAAAGACTATTGAAAGGAGACAGAAGAGAATGGCAAAGAACAGGGAATCTGCTGCAAGATCAAGGGCAAAGAAGCAGGAACACATAAATAAGTTACAGAAGGACAAGTCTCGGTTGGAGAAAACAAATAGCTGGCTCAAAAAGCTGAAGGTGTTACAAGAAGCGGGGCTACTTTGA 894 0.4195 MVSPNRSQEPECPPMVRQGSLYNLSFDEAQSQLGNTGKPLHTMNLDELLKSVLSAESGQLVQNPSSDSFLIGNTDLNGTLNNKTLNEVWREIVPQGRVNRSRENNLQQSILGETTLQDFLARAGVINMGNGQENDDKGDAQSLMAMDPIVMASQHEDWLPLQMQMPSIHIHQQQYQEQQIIGLCPDFSVSKSVYESPVMEIGYSENSMAISMPMVSPTCSDSNGASVVGRKHRYSDEMLEKTIERRQKRMAKNRESAARSRAKKQEHINKLQKDKSRLEKTNSWLKKLKVLQEAGLL. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02075 297 SMART brlzneu 241 294 IPR004827 GO:0003700|GO:0006355
Seca8g02075 297 MobiDBLite consensus disorder prediction 254 275 - -
Seca8g02075 297 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
Seca8g02075 297 Coils Coil 261 288 - -
Seca8g02075 297 Gene3D - 243 294 - -
Seca8g02075 297 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 287 IPR004827 GO:0003700|GO:0006355
Seca8g02075 297 Pfam bZIP transcription factor 245 287 IPR004827 GO:0003700|GO:0006355
Seca8g02075 297 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 288 IPR043452 GO:0003700|GO:0045893
Seca8g02075 297 SUPERFAMILY Leucine zipper domain 245 287 IPR046347 GO:0003700|GO:0006355
Seca8g02075 297 CDD bZIP_plant_BZIP46 245 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02075 Seca-Chr8 44801020 44803353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02075 8 290 bZIP Transcription Factor Family AT2G41070 36.842 4.21e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g02075 bZIP_1 9.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02075 K14432 - gmx:100808654 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02075 8 44801020 44803353 Seca8g02075 8 44801020 44803353 ECH