Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02049 ATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTGTTAGAGAAAGAATACTGAAGTGGGTCATGGAAGAAGGAGATGGGCTTCAAGAATCTACTAAAGGAAACGTAAAAGCAGTTATTCTAGACATGACAAACCTGATGAATGTTGATACTTCCGGAATTCTAGCACTTGAGGAACTGCACAAGAGGTTGCTTTCACGCGGCGTAGAATTAGCTATGGTAAACCCAAGGTGGCTAGTAATTCACAAGCTTAAGGTTGCACACTTTGTGGACAAAATTGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCCGTAGACGCATGTCTCTCTTCTAAAATTTCCACCGCTTGA 393 0.4224 MAISTPGIIVIRISSGSLCFANANFVRERILKWVMEEGDGLQESTKGNVKAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVGEAVDACLSSKISTA. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02049 130 ProSiteProfiles STAS domain profile. 1 122 IPR002645 -
Seca8g02049 130 SUPERFAMILY SpoIIaa-like 6 122 IPR036513 -
Seca8g02049 130 CDD STAS_SulP_like_sulfate_transporter 2 115 - -
Seca8g02049 130 Gene3D STAS domain 1 127 IPR036513 -
Seca8g02049 130 Pfam STAS domain 4 118 IPR002645 -
Seca8g02049 130 PANTHER SULFATE TRANSPORTER 6 123 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02049 Seca-Chr8 43827402 43828701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02049 1 127 Inorganic Solute Cotransporters AT5G10180 52.672 5.15e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02049 K17469 - gmx:100776591 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02049 8 43827402 43828701 Seca4g02763 4 47599881 47600550 PCT