Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02027 ATGGTATCCTTCCTAGCTTGTGAAACCAAGGAGAAGAAGGATGCAACCACACTATCCAACTCCAAGGAACCAAAGGAAAGGCCATTTGGCTCTAAGAACAAGCCTAAGTCACTCATCCTAATTTTAGAAGATAACAATCAATATCTCAAACTGATCATTATTGAAATACTTGTTGGAAATGACATTGCTAAGGCCATAGTCAAGTTCGCTTGTCATGGACATGACGACGTTATAATGCAAAGTGGTTCGGGTTTTGTCTCTGACATTACCCTTCTCCAGCCTCTGTCCCATACTGCTCCTACTTTCTTTATCATTGGACACTTTAACATTATATCTCTCATAGACACTTGCATGAGTTGTCTTTTCCCCTATTCTCTCCTCCTACCTCTGCTTGTTCCTACTTTGTGA 408 0.4069 MVSFLACETKEKKDATTLSNSKEPKERPFGSKNKPKSLILILEDNNQYLKLIIIEILVGNDIAKAIVKFACHGHDDVIMQSGSGFVSDITLLQPLSHTAPTFFIIGHFNIISLIDTCMSCLFPYSLLLPLLVPTL. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02027 135 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 118 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02027 Seca-Chr8 43208430 43208837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02027 21 113 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 37.895 3.16e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02027 - - cave:132164508 85.5001